RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 TNFSF9P41273 254 aa20.5■□□□□ 0.87
NDUFS3-213ENST00000534716 MATR3P43243 847 aaKnown RBP eCLIP20.5■□□□□ 0.87
NDUFS3-213ENST00000534716 AARSP49588 968 aaKnown RBP eCLIP20.5■□□□□ 0.87
NDUFS3-213ENST00000534716 PPP2R3AQ06190 1150 aa20.5■□□□□ 0.87
NDUFS3-213ENST00000534716 ENOX2Q16206 610 aaKnown RBP20.5■□□□□ 0.87
NDUFS3-213ENST00000534716 PHLDB3Q6NSJ2 640 aa20.5■□□□□ 0.87
NDUFS3-213ENST00000534716 SLC39A4Q6P5W5 647 aa20.5■□□□□ 0.87
NDUFS3-213ENST00000534716 PARM1Q6UWI2 310 aa20.5■□□□□ 0.87
NDUFS3-213ENST00000534716 CD302Q8IX05 232 aa20.5■□□□□ 0.87
NDUFS3-213ENST00000534716 RASSF8Q8NHQ8 419 aa20.5■□□□□ 0.87
NDUFS3-213ENST00000534716 DDX12PQ92771 950 aa20.5■□□□□ 0.87
NDUFS3-213ENST00000534716 KIF12Q96FN5 646 aa20.5■□□□□ 0.87
NDUFS3-213ENST00000534716 EPSTI1Q96J88 318 aa20.5■□□□□ 0.87
NDUFS3-213ENST00000534716 TRIP11Q15643 1979 aa20.5■□□□□ 0.87
NDUFS3-213ENST00000534716 LACTBL1A8MY62 500 aa20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 XPOTO43592 962 aaKnown RBP20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 TBCAO75347 108 aaKnown RBP20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 OAZ2O95190 189 aa20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 ELF1P32519 619 aa20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 CTXN3Q4LDR2 81 aa20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 ZNF280DQ6N043 979 aa20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 USP49Q70CQ1 688 aa20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 NPAS3Q8IXF0 933 aa20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 CCDC105Q8IYK2 499 aa20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 GPR152Q8TDT2 470 aa20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 BACH2Q9BYV9 841 aa20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 RPF1Q9H9Y2 349 aaKnown RBP20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 GDE1Q9NZC3 331 aa20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 STK17AQ9UEE5 414 aa20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 AFF4Q9UHB7 1163 aaKnown RBP20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 CPSF3Q9UKF6 684 aaKnown RBP20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 STYXL1Q9Y6J8 313 aa20.49■□□□□ 0.87
NDUFS3-213ENST00000534716 MICAL2O94851 1124 aa20.48■□□□□ 0.87
NDUFS3-213ENST00000534716 RHOP08100 348 aa20.48■□□□□ 0.87
NDUFS3-213ENST00000534716 PTPN2P17706 415 aa20.48■□□□□ 0.87
NDUFS3-213ENST00000534716 PAX3P23760 479 aa20.48■□□□□ 0.87
NDUFS3-213ENST00000534716 POU5F1Q01860 360 aaKnown RBP20.48■□□□□ 0.87
NDUFS3-213ENST00000534716 ZBTB41Q5SVQ8 909 aa20.48■□□□□ 0.87
NDUFS3-213ENST00000534716 KRI1Q8N9T8 703 aaKnown RBP20.48■□□□□ 0.87
NDUFS3-213ENST00000534716 RPP25Q9BUL9 199 aaKnown RBP20.48■□□□□ 0.87
NDUFS3-213ENST00000534716 FAM86C1Q9NVL1 165 aa20.48■□□□□ 0.87
NDUFS3-213ENST00000534716 CCDC39Q9UFE4 941 aa20.48■□□□□ 0.87
NDUFS3-213ENST00000534716 MYH11P35749 1972 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 PRRG1O14668 218 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 SEC24AO95486 1093 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 LRG1P02750 347 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 MARCKSP29966 332 aaPredicted RBP20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 NMT1P30419 496 aaKnown RBP20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 NBL1P41271 181 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 SPAG1Q07617 926 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 SPATA1Q5VX52 437 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 ZNF720Q7Z2F6 126 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 DTWD2Q8NBA8 298 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 BEST2Q8NFU1 509 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 MSTO1Q9BUK6 570 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 STRA6Q9BX79 667 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 CYP4F11Q9HBI6 524 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 ARHGEF3Q9NR81 526 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 SEL1LQ9UBV2 794 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 CA14Q9ULX7 337 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 DERAQ9Y315 318 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 MRPS23Q9Y3D9 190 aaKnown RBP20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 INSL5Q9Y5Q6 135 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 CITO14578 2027 aa20.47■□□□□ 0.87
NDUFS3-213ENST00000534716 PDCD11Q14690 1871 aaKnown RBP20.46■□□□□ 0.87
NDUFS3-213ENST00000534716 ARPP19P56211 112 aa20.46■□□□□ 0.87
NDUFS3-213ENST00000534716 GPC5P78333 572 aa20.46■□□□□ 0.87
NDUFS3-213ENST00000534716 YWHAHQ04917 246 aaPredicted RBP20.46■□□□□ 0.87
NDUFS3-213ENST00000534716 SLC5A9Q2M3M2 681 aa20.46■□□□□ 0.87
NDUFS3-213ENST00000534716 PRSS36Q5K4E3 855 aa20.46■□□□□ 0.87
NDUFS3-213ENST00000534716 SPECC1Q5M775 1068 aa20.46■□□□□ 0.87
NDUFS3-213ENST00000534716 SLFN12LQ6IEE8 588 aa20.46■□□□□ 0.87
NDUFS3-213ENST00000534716 HVCN1Q96D96 273 aa20.46■□□□□ 0.87
NDUFS3-213ENST00000534716 ZHX3Q9H4I2 956 aa20.46■□□□□ 0.87
NDUFS3-213ENST00000534716 ZSCAN16Q9H4T2 348 aaPredicted RBP20.46■□□□□ 0.87
NDUFS3-213ENST00000534716 TBC1D17Q9HA65 648 aa20.46■□□□□ 0.87
NDUFS3-213ENST00000534716 MTMR6Q9Y217 621 aa20.46■□□□□ 0.87
NDUFS3-213ENST00000534716 VPS13AQ96RL7 3174 aa20.45■□□□□ 0.86
NDUFS3-213ENST00000534716 ANKRD63C9JTQ0 380 aa20.45■□□□□ 0.86
NDUFS3-213ENST00000534716 ECI2O75521 394 aa20.45■□□□□ 0.86
NDUFS3-213ENST00000534716 PPP1R37O75864 691 aa20.45■□□□□ 0.86
NDUFS3-213ENST00000534716 TYMPP19971 482 aa20.45■□□□□ 0.86
NDUFS3-213ENST00000534716 STARD6P59095 220 aa20.45■□□□□ 0.86
NDUFS3-213ENST00000534716 ADCY1Q08828 1119 aa20.45■□□□□ 0.86
NDUFS3-213ENST00000534716 SLC39A14Q15043 492 aa20.45■□□□□ 0.86
NDUFS3-213ENST00000534716 ZC2HC1CQ53FD0 456 aaPredicted RBP20.45■□□□□ 0.86
NDUFS3-213ENST00000534716 RRAGBQ5VZM2 374 aa20.45■□□□□ 0.86
NDUFS3-213ENST00000534716 FAM173BQ6P4H8 233 aa20.45■□□□□ 0.86
NDUFS3-213ENST00000534716 TMEM130Q8N3G9 435 aa20.45■□□□□ 0.86
NDUFS3-213ENST00000534716 CLIC6Q96NY7 704 aa20.45■□□□□ 0.86
NDUFS3-213ENST00000534716 ASB7Q9H672 318 aa20.45■□□□□ 0.86
NDUFS3-213ENST00000534716 ZFHX2Q9C0A1 2572 aaPredicted RBP20.45■□□□□ 0.86
NDUFS3-213ENST00000534716 ZNF197O14709 1029 aa20.44■□□□□ 0.86
NDUFS3-213ENST00000534716 TXLNAP40222 546 aa20.44■□□□□ 0.86
NDUFS3-213ENST00000534716 LILRA4P59901 499 aa20.44■□□□□ 0.86
NDUFS3-213ENST00000534716 JADE1Q6IE81 842 aa20.44■□□□□ 0.86
NDUFS3-213ENST00000534716 POTEHQ6S545 545 aa20.44■□□□□ 0.86
NDUFS3-213ENST00000534716 SV2BQ7L1I2 683 aa20.44■□□□□ 0.86
NDUFS3-213ENST00000534716 ST13P5Q8NFI4 369 aaPredicted RBP20.44■□□□□ 0.86
NDUFS3-213ENST00000534716 DNAJC19Q96DA6 116 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms