RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 GLYCTKQ8IVS8 523 aa18.32■□□□□ 0.52
VPS51-216ENST00000534591 LNX1Q8TBB1 728 aaPredicted RBP18.32■□□□□ 0.52
VPS51-216ENST00000534591 TMEM40Q8WWA1 233 aa18.32■□□□□ 0.52
VPS51-216ENST00000534591 NAPGQ99747 312 aaPredicted RBP18.32■□□□□ 0.52
VPS51-216ENST00000534591 APOBEC3GQ9HC16 384 aaKnown RBP18.32■□□□□ 0.52
VPS51-216ENST00000534591 PHF24Q9UPV7 400 aa18.32■□□□□ 0.52
VPS51-216ENST00000534591 COLQQ9Y215 455 aaPredicted RBP18.32■□□□□ 0.52
VPS51-216ENST00000534591 DERAQ9Y315 318 aa18.32■□□□□ 0.52
VPS51-216ENST00000534591 C2CD2Q9Y426 696 aa18.32■□□□□ 0.52
VPS51-216ENST00000534591 DUSP10Q9Y6W6 482 aa18.32■□□□□ 0.52
VPS51-216ENST00000534591 MOXD2PA6NHM9 499 aa18.31■□□□□ 0.52
VPS51-216ENST00000534591 CYP26A1O43174 497 aa18.31■□□□□ 0.52
VPS51-216ENST00000534591 URI1O94763 535 aaPredicted RBP18.31■□□□□ 0.52
VPS51-216ENST00000534591 CST3P01034 146 aaPredicted RBP18.31■□□□□ 0.52
VPS51-216ENST00000534591 MYL6P60660 151 aa18.31■□□□□ 0.52
VPS51-216ENST00000534591 JADE1Q6IE81 842 aa18.31■□□□□ 0.52
VPS51-216ENST00000534591 CHRDL2Q6WN34 429 aa18.31■□□□□ 0.52
VPS51-216ENST00000534591 TRIM58Q8NG06 486 aa18.31■□□□□ 0.52
VPS51-216ENST00000534591 EPS8L1Q8TE68 723 aa18.31■□□□□ 0.52
VPS51-216ENST00000534591 NOCTQ9UK39 431 aaKnown RBP18.31■□□□□ 0.52
VPS51-216ENST00000534591 CNTN6Q9UQ52 1028 aa18.31■□□□□ 0.52
VPS51-216ENST00000534591 NUB1Q9Y5A7 615 aa18.31■□□□□ 0.52
VPS51-216ENST00000534591 A0A1W2PQ45 241 aaPredicted RBP18.3■□□□□ 0.52
VPS51-216ENST00000534591 A0A1W2PQY0 241 aa18.3■□□□□ 0.52
VPS51-216ENST00000534591 MACROD2A1Z1Q3 448 aa18.3■□□□□ 0.52
VPS51-216ENST00000534591 MEFVO15553 781 aaPredicted RBP18.3■□□□□ 0.52
VPS51-216ENST00000534591 NFICP08651 508 aa18.3■□□□□ 0.52
VPS51-216ENST00000534591 PDE6CP51160 858 aa18.3■□□□□ 0.52
VPS51-216ENST00000534591 ACLYP53396 1101 aa18.3■□□□□ 0.52
VPS51-216ENST00000534591 TMEM132DQ14C87 1099 aa18.3■□□□□ 0.52
VPS51-216ENST00000534591 SPOPLQ6IQ16 392 aa18.3■□□□□ 0.52
VPS51-216ENST00000534591 SLC39A5Q6ZMH5 540 aa18.3■□□□□ 0.52
VPS51-216ENST00000534591 NOX5Q96PH1 765 aa18.3■□□□□ 0.52
VPS51-216ENST00000534591 ALS2CR12Q96Q35 445 aa18.3■□□□□ 0.52
VPS51-216ENST00000534591 TSPAN18Q96SJ8 248 aa18.3■□□□□ 0.52
VPS51-216ENST00000534591 NIF3L1Q9GZT8 377 aa18.3■□□□□ 0.52
VPS51-216ENST00000534591 PIN4Q9Y237 131 aaKnown RBP18.3■□□□□ 0.52
VPS51-216ENST00000534591 CDY2AQ9Y6F7 541 aa18.3■□□□□ 0.52
VPS51-216ENST00000534591 GRIN2DO15399 1336 aa18.29■□□□□ 0.52
VPS51-216ENST00000534591 ANO9A1A5B4 782 aa18.29■□□□□ 0.52
VPS51-216ENST00000534591 KRT5P13647 590 aa18.29■□□□□ 0.52
VPS51-216ENST00000534591 CYP11B1P15538 503 aa18.29■□□□□ 0.52
VPS51-216ENST00000534591 ACO1P21399 889 aaKnown RBP18.29■□□□□ 0.52
VPS51-216ENST00000534591 ATICP31939 592 aa18.29■□□□□ 0.52
VPS51-216ENST00000534591 YARSP54577 528 aaKnown RBP18.29■□□□□ 0.52
VPS51-216ENST00000534591 ITGA7Q13683 1181 aa18.29■□□□□ 0.52
VPS51-216ENST00000534591 TRIM60Q495X7 471 aa18.29■□□□□ 0.52
VPS51-216ENST00000534591 NOP9Q86U38 636 aaKnown RBP18.29■□□□□ 0.52
VPS51-216ENST00000534591 ZNF677Q86XU0 584 aa18.29■□□□□ 0.52
VPS51-216ENST00000534591 RPUSD2Q8IZ73 545 aaKnown RBP18.29■□□□□ 0.52
VPS51-216ENST00000534591 SLC20A1Q8WUM9 679 aa18.29■□□□□ 0.52
VPS51-216ENST00000534591 TRIM6Q9C030 488 aaPredicted RBP18.29■□□□□ 0.52
VPS51-216ENST00000534591 PCDHB2Q9Y5E7 798 aa18.29■□□□□ 0.52
VPS51-216ENST00000534591 CITO14578 2027 aa18.29■□□□□ 0.52
VPS51-216ENST00000534591 A0A0A6YYK5 440 aaPredicted RBP18.28■□□□□ 0.52
VPS51-216ENST00000534591 GZMAP12544 262 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 GTF2F1P35269 517 aaKnown RBP eCLIP18.28■□□□□ 0.52
VPS51-216ENST00000534591 YWHAEP62258 255 aaKnown RBP18.28■□□□□ 0.52
VPS51-216ENST00000534591 CDR2Q01850 454 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 PTK7Q13308 1070 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 PTGISQ16647 500 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 IFI16Q16666 785 aaKnown RBP18.28■□□□□ 0.52
VPS51-216ENST00000534591 ZNF699Q32M78 642 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 SLC47A2Q86VL8 602 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 C1orf127Q8N9H9 656 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 ARID3AQ99856 593 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 EIF2AQ9BY44 585 aaKnown RBP18.28■□□□□ 0.52
VPS51-216ENST00000534591 XYLT2Q9H1B5 865 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 SIX4Q9UIU6 781 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 ITGA11Q9UKX5 1188 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 ATP11BQ9Y2G3 1177 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 RALGAPA2Q2PPJ7 1873 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 CLSTN1O94985 981 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 TMEM253P0C7T8 217 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 CHRNB2P17787 502 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 FAM228AQ86W67 206 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 UBR7Q8N806 425 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 ELMO3Q96BJ8 720 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 SNX27Q96L92 541 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 GLT1D1Q96MS3 346 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 PACSIN1Q9BY11 444 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 PRO3102Q9H379 93 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 VRTNQ9H8Y1 702 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 SEPT11Q9NVA2 429 aaKnown RBP18.28■□□□□ 0.52
VPS51-216ENST00000534591 SNTG2Q9NY99 539 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 NOC2LQ9Y3T9 749 aaKnown RBP18.28■□□□□ 0.52
VPS51-216ENST00000534591 PCDHB4Q9Y5E5 795 aa18.28■□□□□ 0.52
VPS51-216ENST00000534591 UMODL1Q5DID0 1318 aa18.27■□□□□ 0.52
VPS51-216ENST00000534591 MOCS3O95396 460 aa18.27■□□□□ 0.51
VPS51-216ENST00000534591 STAU1O95793 577 aaKnown RBP18.27■□□□□ 0.51
VPS51-216ENST00000534591 GALCP54803 685 aa18.27■□□□□ 0.51
VPS51-216ENST00000534591 RBP5P82980 135 aa18.27■□□□□ 0.51
VPS51-216ENST00000534591 FMO1Q01740 532 aa18.27■□□□□ 0.51
VPS51-216ENST00000534591 MGAT3Q09327 533 aa18.27■□□□□ 0.51
VPS51-216ENST00000534591 UBXN11Q5T124 520 aa18.27■□□□□ 0.51
VPS51-216ENST00000534591 DDX1Q92499 740 aaKnown RBP18.27■□□□□ 0.51
VPS51-216ENST00000534591 KIF12Q96FN5 646 aa18.27■□□□□ 0.51
VPS51-216ENST00000534591 ISCUQ9H1K1 167 aa18.27■□□□□ 0.51
VPS51-216ENST00000534591 CHST12Q9NRB3 414 aa18.27■□□□□ 0.51
VPS51-216ENST00000534591 JRKLQ9Y4A0 524 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms