RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 HNRNPA1P09651 372 aaKnown RBP eCLIP15.31■□□□□ 0.04
SF3B2-215ENST00000534307 LRPAP1P30533 357 aa15.31■□□□□ 0.04
SF3B2-215ENST00000534307 NBL1P41271 181 aa15.31■□□□□ 0.04
SF3B2-215ENST00000534307 SPAG1Q07617 926 aa15.31■□□□□ 0.04
SF3B2-215ENST00000534307 VARS2Q5ST30 1063 aaKnown RBP15.31■□□□□ 0.04
SF3B2-215ENST00000534307 SV2BQ7L1I2 683 aa15.31■□□□□ 0.04
SF3B2-215ENST00000534307 HSCBQ8IWL3 235 aa15.31■□□□□ 0.04
SF3B2-215ENST00000534307 ACSF2Q96CM8 615 aaPredicted RBP15.31■□□□□ 0.04
SF3B2-215ENST00000534307 IKZF4Q9H2S9 585 aa15.31■□□□□ 0.04
SF3B2-215ENST00000534307 EPS15L1Q9UBC2 864 aa15.31■□□□□ 0.04
SF3B2-215ENST00000534307 LACTBL1A8MY62 500 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 SPTLC2O15270 562 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 PPP6R2O75170 966 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 YEATS4O95619 227 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 C8AP07357 584 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 PDIA4P13667 645 aaKnown RBP15.3■□□□□ 0.04
SF3B2-215ENST00000534307 CYP3A5P20815 502 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 STAT6P42226 847 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 MATR3P43243 847 aaKnown RBP eCLIP15.3■□□□□ 0.04
SF3B2-215ENST00000534307 AARSP49588 968 aaKnown RBP eCLIP15.3■□□□□ 0.04
SF3B2-215ENST00000534307 NUBP1P53384 320 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 PPP2R3AQ06190 1150 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 STK38Q15208 465 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 E2F4Q16254 413 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 LIN9Q5TKA1 542 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 RTL10Q7L3V2 364 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 STAMQ92783 540 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 HVCN1Q96D96 273 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 KIF12Q96FN5 646 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 MYADMQ96S97 322 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 TSPAN18Q96SJ8 248 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 MSTO1Q9BUK6 570 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 OLFML3Q9NRN5 406 aa15.3■□□□□ 0.04
SF3B2-215ENST00000534307 TFIP11Q9UBB9 837 aaKnown RBP15.3■□□□□ 0.04
SF3B2-215ENST00000534307 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.3■□□□□ 0.04
SF3B2-215ENST00000534307 NOTCH4Q99466 2003 aa15.29■□□□□ 0.04
SF3B2-215ENST00000534307 ABLIM3O94929 683 aa15.29■□□□□ 0.04
SF3B2-215ENST00000534307 ZSCAN22P10073 491 aaPredicted RBP15.29■□□□□ 0.04
SF3B2-215ENST00000534307 GAP43P17677 238 aa15.29■□□□□ 0.04
SF3B2-215ENST00000534307 ADSSP30520 456 aa15.29■□□□□ 0.04
SF3B2-215ENST00000534307 ROR1Q01973 937 aa15.29■□□□□ 0.04
SF3B2-215ENST00000534307 KCNA1Q09470 495 aa15.29■□□□□ 0.04
SF3B2-215ENST00000534307 PKP1Q13835 747 aa15.29■□□□□ 0.04
SF3B2-215ENST00000534307 UVSSAQ2YD98 709 aa15.29■□□□□ 0.04
SF3B2-215ENST00000534307 PPM1LQ5SGD2 360 aa15.29■□□□□ 0.04
SF3B2-215ENST00000534307 AXDND1Q5T1B0 1012 aaPredicted RBP15.29■□□□□ 0.04
SF3B2-215ENST00000534307 SLC7A14Q8TBB6 771 aa15.29■□□□□ 0.04
SF3B2-215ENST00000534307 ZNF396Q96N95 335 aaPredicted RBP15.29■□□□□ 0.04
SF3B2-215ENST00000534307 PANK2Q9BZ23 570 aa15.29■□□□□ 0.04
SF3B2-215ENST00000534307 RPF1Q9H9Y2 349 aaKnown RBP15.29■□□□□ 0.04
SF3B2-215ENST00000534307 KCNK12Q9HB15 430 aa15.29■□□□□ 0.04
SF3B2-215ENST00000534307 PIDD1Q9HB75 910 aa15.29■□□□□ 0.04
SF3B2-215ENST00000534307 UBQLN1Q9UMX0 589 aaKnown RBP15.29■□□□□ 0.04
SF3B2-215ENST00000534307 NUB1Q9Y5A7 615 aa15.29■□□□□ 0.04
SF3B2-215ENST00000534307 WDR27A2RRH5 827 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 M0QZQ0 153 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 F13A1P00488 732 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 MCM4P33991 863 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 GUCY2FP51841 1108 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 CASP5P51878 434 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 SPATA1Q5VX52 437 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 SHC4Q6S5L8 630 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 CD302Q8IX05 232 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 PDILTQ8N807 584 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 TMEM105Q8N8V8 129 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 ZNF461Q8TAF7 563 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 FGFBP2Q9BYJ0 223 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 MRPL44Q9H9J2 332 aaKnown RBP15.28■□□□□ 0.04
SF3B2-215ENST00000534307 KBTBD4Q9NVX7 518 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.28■□□□□ 0.04
SF3B2-215ENST00000534307 FBXL5Q9UKA1 691 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 PCDHB8Q9UN66 801 aa15.28■□□□□ 0.04
SF3B2-215ENST00000534307 OTOGLQ3ZCN5 2332 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 ARHGEF37A1IGU5 675 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 PPEF2O14830 753 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 CUTAO60888 179 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 NFICP08651 508 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 LAMP2P13473 410 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 GBP2P32456 591 aaPredicted RBP15.27■□□□□ 0.04
SF3B2-215ENST00000534307 ID4P47928 161 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 ACOT2P49753 483 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 NTHL1P78549 312 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 POU5F1Q01860 360 aaKnown RBP15.27■□□□□ 0.04
SF3B2-215ENST00000534307 TDGQ13569 410 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 L1TD1Q5T7N2 865 aaKnown RBP15.27■□□□□ 0.04
SF3B2-215ENST00000534307 FOXD4L5Q5VV16 416 aaPredicted RBP15.27■□□□□ 0.04
SF3B2-215ENST00000534307 ADALQ6DHV7 355 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 JADE1Q6IE81 842 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 SLFN12LQ6IEE8 588 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 CRELD2Q6UXH1 353 aaPredicted RBP15.27■□□□□ 0.04
SF3B2-215ENST00000534307 GRASPQ7Z6J2 395 aaPredicted RBP15.27■□□□□ 0.04
SF3B2-215ENST00000534307 FOXD4L4Q8WXT5 416 aaPredicted RBP15.27■□□□□ 0.04
SF3B2-215ENST00000534307 TNMDQ9H2S6 317 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 TBC1D7Q9P0N9 293 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 IGSF9Q9P2J2 1179 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 AGO2Q9UKV8 859 aaKnown RBP15.27■□□□□ 0.04
SF3B2-215ENST00000534307 DUSP12Q9UNI6 340 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 DERAQ9Y315 318 aa15.27■□□□□ 0.04
SF3B2-215ENST00000534307 ACACBO00763 2458 aa15.27■□□□□ 0.03
SF3B2-215ENST00000534307 SPTBN2O15020 2390 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms