RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 SEZ6Q53EL9 994 aa18.42■□□□□ 0.54
CAPRIN1-216ENST00000534042 PRSS36Q5K4E3 855 aa18.42■□□□□ 0.54
CAPRIN1-216ENST00000534042 CYP4A22Q5TCH4 519 aa18.42■□□□□ 0.54
CAPRIN1-216ENST00000534042 MCTP1Q6DN14 999 aa18.42■□□□□ 0.54
CAPRIN1-216ENST00000534042 IQCEQ6IPM2 695 aa18.42■□□□□ 0.54
CAPRIN1-216ENST00000534042 POTEHQ6S545 545 aa18.42■□□□□ 0.54
CAPRIN1-216ENST00000534042 PDZD4Q76G19 769 aaPredicted RBP18.42■□□□□ 0.54
CAPRIN1-216ENST00000534042 KIAA2013Q8IYS2 634 aa18.42■□□□□ 0.54
CAPRIN1-216ENST00000534042 RUBCNQ92622 972 aa18.42■□□□□ 0.54
CAPRIN1-216ENST00000534042 TBC1D32Q96NH3 1257 aa18.42■□□□□ 0.54
CAPRIN1-216ENST00000534042 KIF2CQ99661 725 aa18.42■□□□□ 0.54
CAPRIN1-216ENST00000534042 ZFP14Q9HCL3 533 aa18.42■□□□□ 0.54
CAPRIN1-216ENST00000534042 MRPS17Q9Y2R5 130 aaKnown RBP18.42■□□□□ 0.54
CAPRIN1-216ENST00000534042 ZNF292O60281 2723 aa18.42■□□□□ 0.54
CAPRIN1-216ENST00000534042 PATJQ8NI35 1801 aa18.42■□□□□ 0.54
CAPRIN1-216ENST00000534042 CEP250Q9BV73 2442 aa18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 MEFVO15553 781 aaPredicted RBP18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 MICAL2O94851 1124 aa18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 MARCKSP29966 332 aaPredicted RBP18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 MATR3P43243 847 aaKnown RBP eCLIP18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 ADCY1Q08828 1119 aa18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 RILPL1Q5EBL4 403 aa18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 HYIQ5T013 277 aa18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 ZPBP2Q6X784 338 aa18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 ZNF852Q6ZMS4 543 aa18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 KCTD17Q8N5Z5 321 aa18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 SYT2Q8N9I0 419 aaPredicted RBP18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 TMEM161BQ8NDZ6 487 aa18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 DDX12PQ92771 950 aa18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 TCEAL4Q96EI5 215 aa18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 BORCS6Q96GS4 357 aa18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 ZNF512Q96ME7 567 aaPredicted RBP18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 HEBP1Q9NRV9 189 aa18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 AFF4Q9UHB7 1163 aaKnown RBP18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 MAFFQ9ULX9 164 aa18.41■□□□□ 0.54
CAPRIN1-216ENST00000534042 CLDN3O15551 220 aa18.4■□□□□ 0.54
CAPRIN1-216ENST00000534042 MAPTP10636 758 aaKnown RBP18.4■□□□□ 0.54
CAPRIN1-216ENST00000534042 CPB1P15086 417 aa18.4■□□□□ 0.54
CAPRIN1-216ENST00000534042 TARSP26639 723 aaKnown RBP18.4■□□□□ 0.54
CAPRIN1-216ENST00000534042 ATP2C1P98194 919 aaPredicted RBP18.4■□□□□ 0.54
CAPRIN1-216ENST00000534042 CSTF1Q05048 431 aaKnown RBP18.4■□□□□ 0.54
CAPRIN1-216ENST00000534042 FAM78AQ5JUQ0 283 aa18.4■□□□□ 0.54
CAPRIN1-216ENST00000534042 DNASE1L2Q92874 299 aa18.4■□□□□ 0.54
CAPRIN1-216ENST00000534042 CLDN23Q96B33 292 aa18.4■□□□□ 0.54
CAPRIN1-216ENST00000534042 CDK5RAP3Q96JB5 506 aa18.4■□□□□ 0.54
CAPRIN1-216ENST00000534042 PNMA5Q96PV4 448 aa18.4■□□□□ 0.54
CAPRIN1-216ENST00000534042 PLIN2Q99541 437 aa18.4■□□□□ 0.54
CAPRIN1-216ENST00000534042 BRD9Q9H8M2 597 aa18.4■□□□□ 0.54
CAPRIN1-216ENST00000534042 TUBGCP4Q9UGJ1 667 aa18.4■□□□□ 0.54
CAPRIN1-216ENST00000534042 PCDHB8Q9UN66 801 aa18.4■□□□□ 0.54
CAPRIN1-216ENST00000534042 CLTAP09496 248 aa18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 CXCL8P10145 99 aa18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 FCARP24071 287 aa18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 CCR2P41597 374 aa18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 MCL1Q07820 350 aa18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 TWF1Q12792 350 aa18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 GRM2Q14416 872 aa18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 DCLK2Q8N568 766 aa18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 SUMF1Q8NBK3 374 aa18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 ATRIPQ8WXE1 791 aa18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 RMDN1Q96DB5 314 aa18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 BICD1Q96G01 975 aa18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 ASB16Q96NS5 453 aa18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 TRMT61BQ9BVS5 477 aaKnown RBP18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 PLEKHA5Q9HAU0 1116 aa18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 KCND2Q9NZV8 630 aa18.39■□□□□ 0.53
CAPRIN1-216ENST00000534042 VWA3AA6NCI4 1184 aa18.38■□□□□ 0.53
CAPRIN1-216ENST00000534042 H0YCG3 227 aa18.38■□□□□ 0.53
CAPRIN1-216ENST00000534042 SPTLC1O15269 473 aa18.38■□□□□ 0.53
CAPRIN1-216ENST00000534042 PLA2G4BP0C869 781 aa18.38■□□□□ 0.53
CAPRIN1-216ENST00000534042 MYL4P12829 197 aa18.38■□□□□ 0.53
CAPRIN1-216ENST00000534042 RPS9P46781 194 aaKnown RBP18.38■□□□□ 0.53
CAPRIN1-216ENST00000534042 SLC12A3P55017 1021 aa18.38■□□□□ 0.53
CAPRIN1-216ENST00000534042 SPAG1Q07617 926 aa18.38■□□□□ 0.53
CAPRIN1-216ENST00000534042 HS6ST3Q8IZP7 471 aa18.38■□□□□ 0.53
CAPRIN1-216ENST00000534042 LEMD2Q8NC56 503 aa18.38■□□□□ 0.53
CAPRIN1-216ENST00000534042 ASAH2Q9NR71 780 aa18.38■□□□□ 0.53
CAPRIN1-216ENST00000534042 CEP72Q9P209 647 aa18.38■□□□□ 0.53
CAPRIN1-216ENST00000534042 LARSQ9P2J5 1176 aaKnown RBP18.38■□□□□ 0.53
CAPRIN1-216ENST00000534042 PCDHGA2Q9Y5H1 932 aa18.38■□□□□ 0.53
CAPRIN1-216ENST00000534042 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.38■□□□□ 0.53
CAPRIN1-216ENST00000534042 WDR87Q6ZQQ6 2873 aa18.37■□□□□ 0.53
CAPRIN1-216ENST00000534042 CACNA1AO00555 2505 aa18.37■□□□□ 0.53
CAPRIN1-216ENST00000534042 TTC26A0AVF1 554 aa18.37■□□□□ 0.53
CAPRIN1-216ENST00000534042 MAN2B1O00754 1011 aa18.37■□□□□ 0.53
CAPRIN1-216ENST00000534042 LRPAP1P30533 357 aa18.37■□□□□ 0.53
CAPRIN1-216ENST00000534042 YWHAHQ04917 246 aaPredicted RBP18.37■□□□□ 0.53
CAPRIN1-216ENST00000534042 RNF19BQ6ZMZ0 732 aa18.37■□□□□ 0.53
CAPRIN1-216ENST00000534042 SMARCD2Q92925 531 aa18.37■□□□□ 0.53
CAPRIN1-216ENST00000534042 IRF7Q92985 503 aa18.37■□□□□ 0.53
CAPRIN1-216ENST00000534042 KIF12Q96FN5 646 aa18.37■□□□□ 0.53
CAPRIN1-216ENST00000534042 ZSCAN32Q9NX65 697 aa18.37■□□□□ 0.53
CAPRIN1-216ENST00000534042 UBQLN1Q9UMX0 589 aaKnown RBP18.37■□□□□ 0.53
CAPRIN1-216ENST00000534042 NPHP3-ACAD11A0A0J9YXS1 232 aa18.36■□□□□ 0.53
CAPRIN1-216ENST00000534042 M0QZQ0 153 aa18.36■□□□□ 0.53
CAPRIN1-216ENST00000534042 XPOTO43592 962 aaKnown RBP18.36■□□□□ 0.53
CAPRIN1-216ENST00000534042 MOSPD3O75425 235 aa18.36■□□□□ 0.53
CAPRIN1-216ENST00000534042 OAZ2O95190 189 aa18.36■□□□□ 0.53
CAPRIN1-216ENST00000534042 PSMC3P17980 439 aa18.36■□□□□ 0.53
CAPRIN1-216ENST00000534042 CYP3A5P20815 502 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms