RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 A0A1W2PQC6 194 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 HUS1O60921 280 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 TADA2AO75478 443 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 B3GAT3O94766 335 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 C4BPAP04003 597 aaKnown RBP12.22□□□□□ -0.45
GMDS-210ENST00000533279 MFAP3P55082 362 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 KRT17Q04695 432 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 ZBTB6Q15916 424 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 CBWD6Q4V339 395 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 CBWD3Q5JTY5 395 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 MIIPQ5JXC2 388 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 CBWD5Q5RIA9 395 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 C9orf50Q5SZB4 431 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 C9orf57Q5W0N0 161 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 CACNA2D4Q7Z3S7 1137 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 PPFIBP1Q86W92 1011 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 METTL23Q86XA0 190 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 ZNF397Q8NF99 534 aaPredicted RBP12.22□□□□□ -0.45
GMDS-210ENST00000533279 VWCEQ96DN2 955 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 TMEM169Q96HH4 297 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 FAXDC2Q96IV6 333 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 ERGIC2Q96RQ1 377 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 NUP58Q9BVL2 599 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 LSM14BQ9BX40 385 aaKnown RBP12.22□□□□□ -0.45
GMDS-210ENST00000533279 XPO4Q9C0E2 1151 aaKnown RBP12.22□□□□□ -0.45
GMDS-210ENST00000533279 HSD3B7Q9H2F3 369 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 DSEQ9UL01 958 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 PRG3Q9Y2Y8 225 aaPredicted RBP12.22□□□□□ -0.45
GMDS-210ENST00000533279 PCDHA11Q9Y5I1 949 aa12.22□□□□□ -0.45
GMDS-210ENST00000533279 TDRD15B5MCY1 1934 aaKnown RBP12.21□□□□□ -0.45
GMDS-210ENST00000533279 STAU1O95793 577 aaKnown RBP12.21□□□□□ -0.45
GMDS-210ENST00000533279 ODC1P11926 461 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 GATMP50440 423 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 CLCNKBP51801 687 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 WNT7BP56706 349 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 MCCD1P59942 119 aaPredicted RBP12.21□□□□□ -0.45
GMDS-210ENST00000533279 NOP14P78316 857 aaKnown RBP12.21□□□□□ -0.45
GMDS-210ENST00000533279 HTRA4P83105 476 aaPredicted RBP12.21□□□□□ -0.45
GMDS-210ENST00000533279 SYCP1Q15431 976 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 TSR1Q2NL82 804 aaKnown RBP12.21□□□□□ -0.45
GMDS-210ENST00000533279 RASIP1Q5U651 963 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 CHRDL2Q6WN34 429 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 ENOSF1Q7L5Y1 443 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 COLGALT2Q8IYK4 626 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 PPM1KQ8N3J5 372 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 EHBP1Q8NDI1 1231 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 APPL2Q8NEU8 664 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 TAS1R2Q8TE23 839 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 ZNF689Q96CS4 500 aaPredicted RBP12.21□□□□□ -0.45
GMDS-210ENST00000533279 MRFAP1L1Q96HT8 127 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 MMS19Q96T76 1030 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 CRACR2AQ9BSW2 395 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 NIF3L1Q9GZT8 377 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 GOLGA2P5Q9HBQ8 144 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 RNF19AQ9NV58 838 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 SPG21Q9NZD8 308 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 PUF60Q9UHX1 559 aaKnown RBP12.21□□□□□ -0.45
GMDS-210ENST00000533279 PLAGL2Q9UPG8 496 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 COQ4Q9Y3A0 265 aa12.21□□□□□ -0.45
GMDS-210ENST00000533279 PTPRJQ12913 1337 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 A0A1W2PPC1 479 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 KPNA7A9QM74 516 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 TMEM189-UBE2V1I3L0A0 370 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 LPXNO60711 386 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 CCDC172P0C7W6 258 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 CTNNB1P35222 781 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 GUCY2FP51841 1108 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 BCAR1P56945 870 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 MYL6P60660 151 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 DSC1Q08554 894 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 UPP1Q16831 310 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 WDR72Q3MJ13 1102 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 EPC2Q52LR7 807 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 C1orf220Q5T0J3 134 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 SPECC1LQ69YQ0 1117 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 PDXDC1Q6P996 788 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 TRIM65Q6PJ69 517 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 KCNT2Q6UVM3 1135 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 C15orf39Q6ZRI6 1047 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.2□□□□□ -0.46
GMDS-210ENST00000533279 CRIPAKQ8N1N5 446 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 GSTCDQ8NEC7 633 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 ZNF516Q92618 1163 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 SPAG5Q96R06 1193 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 FAM124BQ9H5Z6 455 aaPredicted RBP12.2□□□□□ -0.46
GMDS-210ENST00000533279 NRDE2Q9H7Z3 1164 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 MIOSQ9NXC5 875 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 NXF1Q9UBU9 619 aaKnown RBP12.2□□□□□ -0.46
GMDS-210ENST00000533279 APEX2Q9UBZ4 518 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 ADAM28Q9UKQ2 775 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 SNX9Q9Y5X1 595 aa12.2□□□□□ -0.46
GMDS-210ENST00000533279 MRPL42Q9Y6G3 142 aaKnown RBP12.2□□□□□ -0.46
GMDS-210ENST00000533279 ITIH6Q6UXX5 1313 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 ANO9A1A5B4 782 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 PIRO00625 290 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 NRP1O14786 923 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 NRDCO43847 1150 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 DDHD2O94830 711 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 KIF4AO95239 1232 aa12.19□□□□□ -0.46
GMDS-210ENST00000533279 ASS1P00966 412 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms