RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 CGNQ9P2M7 1197 aaKnown RBP22.18■■□□□ 1.14
CCS-208ENST00000533244 FAM50BQ9Y247 325 aa22.18■■□□□ 1.14
CCS-208ENST00000533244 ANO9A1A5B4 782 aa22.17■■□□□ 1.14
CCS-208ENST00000533244 SYN3O14994 580 aa22.17■■□□□ 1.14
CCS-208ENST00000533244 TKTP29401 623 aaKnown RBP22.17■■□□□ 1.14
CCS-208ENST00000533244 PSMD5Q16401 504 aa22.17■■□□□ 1.14
CCS-208ENST00000533244 CEP57Q86XR8 500 aa22.17■■□□□ 1.14
CCS-208ENST00000533244 SUSD6Q92537 303 aa22.17■■□□□ 1.14
CCS-208ENST00000533244 CCDC34Q96HJ3 373 aa22.17■■□□□ 1.14
CCS-208ENST00000533244 CLSTN3Q9BQT9 956 aa22.17■■□□□ 1.14
CCS-208ENST00000533244 MTRRQ9UBK8 725 aa22.17■■□□□ 1.14
CCS-208ENST00000533244 NUB1Q9Y5A7 615 aa22.17■■□□□ 1.14
CCS-208ENST00000533244 RPL17P18621 184 aaKnown RBP22.16■■□□□ 1.14
CCS-208ENST00000533244 LILRA6Q6PI73 481 aa22.16■■□□□ 1.14
CCS-208ENST00000533244 HS2ST1Q7LGA3 356 aa22.16■■□□□ 1.14
CCS-208ENST00000533244 TMEM174Q8WUU8 243 aa22.16■■□□□ 1.14
CCS-208ENST00000533244 UHRF1Q96T88 793 aaPredicted RBP22.16■■□□□ 1.14
CCS-208ENST00000533244 KCTD10Q9H3F6 313 aa22.16■■□□□ 1.14
CCS-208ENST00000533244 KIAA1586Q9HCI6 787 aa22.16■■□□□ 1.14
CCS-208ENST00000533244 M0QZQ0 153 aa22.15■■□□□ 1.14
CCS-208ENST00000533244 PIRO00625 290 aa22.15■■□□□ 1.14
CCS-208ENST00000533244 PPEF2O14830 753 aa22.15■■□□□ 1.14
CCS-208ENST00000533244 GADD45BO75293 160 aaPredicted RBP22.15■■□□□ 1.14
CCS-208ENST00000533244 GLUD1P00367 558 aa22.15■■□□□ 1.14
CCS-208ENST00000533244 MRPL58Q14197 206 aaKnown RBP22.15■■□□□ 1.14
CCS-208ENST00000533244 C9orf57Q5W0N0 161 aa22.15■■□□□ 1.14
CCS-208ENST00000533244 ANKS3Q6ZW76 656 aa22.15■■□□□ 1.14
CCS-208ENST00000533244 CBWD2Q8IUF1 395 aa22.15■■□□□ 1.14
CCS-208ENST00000533244 CCDC47Q96A33 483 aaKnown RBP22.15■■□□□ 1.14
CCS-208ENST00000533244 USP15Q9Y4E8 981 aaPredicted RBP22.15■■□□□ 1.14
CCS-208ENST00000533244 BACE2Q9Y5Z0 518 aa22.15■■□□□ 1.14
CCS-208ENST00000533244 BDP1A6H8Y1 2624 aa22.15■■□□□ 1.14
CCS-208ENST00000533244 MUC3AQ02505 3323 aa22.15■■□□□ 1.14
CCS-208ENST00000533244 ZNF233A6NK53 670 aa22.14■■□□□ 1.14
CCS-208ENST00000533244 PAPLNO95428 1278 aa22.14■■□□□ 1.14
CCS-208ENST00000533244 PAX3P23760 479 aa22.14■■□□□ 1.14
CCS-208ENST00000533244 MCM4P33991 863 aa22.14■■□□□ 1.14
CCS-208ENST00000533244 ELOA2Q8IYF1 753 aaPredicted RBP22.14■■□□□ 1.14
CCS-208ENST00000533244 SPATA20Q8TB22 786 aa22.14■■□□□ 1.14
CCS-208ENST00000533244 GOLGA5Q8TBA6 731 aa22.14■■□□□ 1.14
CCS-208ENST00000533244 HDAC7Q8WUI4 952 aa22.14■■□□□ 1.14
CCS-208ENST00000533244 NECAB3Q96P71 396 aaPredicted RBP22.14■■□□□ 1.14
CCS-208ENST00000533244 PRKAG3Q9UGI9 489 aa22.14■■□□□ 1.14
CCS-208ENST00000533244 CLIC2O15247 247 aa22.14■■□□□ 1.13
CCS-208ENST00000533244 ADAM12O43184 909 aa22.14■■□□□ 1.13
CCS-208ENST00000533244 TGM5O43548 720 aa22.14■■□□□ 1.13
CCS-208ENST00000533244 TBC1D4O60343 1298 aa22.14■■□□□ 1.13
CCS-208ENST00000533244 ITIH3Q06033 890 aa22.14■■□□□ 1.13
CCS-208ENST00000533244 PNOCQ13519 176 aa22.14■■□□□ 1.13
CCS-208ENST00000533244 VARS2Q5ST30 1063 aaKnown RBP22.14■■□□□ 1.13
CCS-208ENST00000533244 RSPO2Q6UXX9 243 aaPredicted RBP22.14■■□□□ 1.13
CCS-208ENST00000533244 XXYLT1Q8NBI6 393 aa22.14■■□□□ 1.13
CCS-208ENST00000533244 ADAM7Q9H2U9 754 aa22.14■■□□□ 1.13
CCS-208ENST00000533244 SFXN1Q9H9B4 322 aa22.14■■□□□ 1.13
CCS-208ENST00000533244 PDE11AQ9HCR9 933 aa22.14■■□□□ 1.13
CCS-208ENST00000533244 DPP3Q9NY33 737 aa22.14■■□□□ 1.13
CCS-208ENST00000533244 PCDHB8Q9UN66 801 aa22.14■■□□□ 1.13
CCS-208ENST00000533244 MTCL1Q9Y4B5 1905 aaKnown RBP22.13■■□□□ 1.13
CCS-208ENST00000533244 C5orf42Q9H799 3197 aa22.13■■□□□ 1.13
CCS-208ENST00000533244 PDXKO00764 312 aa22.13■■□□□ 1.13
CCS-208ENST00000533244 LILRA4P59901 499 aa22.13■■□□□ 1.13
CCS-208ENST00000533244 SNRNP35Q16560 246 aaKnown RBP22.13■■□□□ 1.13
CCS-208ENST00000533244 SLC9A9Q8IVB4 645 aa22.13■■□□□ 1.13
CCS-208ENST00000533244 CXorf38Q8TB03 319 aa22.13■■□□□ 1.13
CCS-208ENST00000533244 MAN1C1Q9NR34 630 aa22.13■■□□□ 1.13
CCS-208ENST00000533244 DMAC2Q9NW81 257 aa22.13■■□□□ 1.13
CCS-208ENST00000533244 DPP7Q9UHL4 492 aa22.13■■□□□ 1.13
CCS-208ENST00000533244 SCN1AP35498 2009 aa22.12■■□□□ 1.13
CCS-208ENST00000533244 DLL1O00548 723 aa22.12■■□□□ 1.13
CCS-208ENST00000533244 SPTLC1O15269 473 aa22.12■■□□□ 1.13
CCS-208ENST00000533244 CYP2J2P51589 502 aa22.12■■□□□ 1.13
CCS-208ENST00000533244 ZP2Q05996 745 aa22.12■■□□□ 1.13
CCS-208ENST00000533244 RAB33AQ14088 237 aa22.12■■□□□ 1.13
CCS-208ENST00000533244 SURF1Q15526 300 aa22.12■■□□□ 1.13
CCS-208ENST00000533244 SLC8B1Q6J4K2 584 aa22.12■■□□□ 1.13
CCS-208ENST00000533244 PALB2Q86YC2 1186 aa22.12■■□□□ 1.13
CCS-208ENST00000533244 GLYCTKQ8IVS8 523 aa22.12■■□□□ 1.13
CCS-208ENST00000533244 GUF1Q8N442 669 aaKnown RBP22.12■■□□□ 1.13
CCS-208ENST00000533244 C12orf76Q8N812 135 aaPredicted RBP22.12■■□□□ 1.13
CCS-208ENST00000533244 C1orf127Q8N9H9 656 aa22.12■■□□□ 1.13
CCS-208ENST00000533244 CMASQ8NFW8 434 aaPredicted RBP22.12■■□□□ 1.13
CCS-208ENST00000533244 NOC3LQ8WTT2 800 aaKnown RBP22.12■■□□□ 1.13
CCS-208ENST00000533244 APOL5Q9BWW9 433 aa22.12■■□□□ 1.13
CCS-208ENST00000533244 PLEKHA4Q9H4M7 779 aa22.12■■□□□ 1.13
CCS-208ENST00000533244 FBXW11Q9UKB1 542 aa22.12■■□□□ 1.13
CCS-208ENST00000533244 PTPRJQ12913 1337 aa22.11■■□□□ 1.13
CCS-208ENST00000533244 KIF20AO95235 890 aa22.11■■□□□ 1.13
CCS-208ENST00000533244 TFAMQ00059 246 aaKnown RBP22.11■■□□□ 1.13
CCS-208ENST00000533244 RARS2Q5T160 578 aaKnown RBP22.11■■□□□ 1.13
CCS-208ENST00000533244 CLEC17AQ6ZS10 378 aa22.11■■□□□ 1.13
CCS-208ENST00000533244 ADHFE1Q8IWW8 467 aa22.11■■□□□ 1.13
CCS-208ENST00000533244 APPL2Q8NEU8 664 aa22.11■■□□□ 1.13
CCS-208ENST00000533244 CACTINQ8WUQ7 758 aaKnown RBP22.11■■□□□ 1.13
CCS-208ENST00000533244 GSDMAQ96QA5 445 aa22.11■■□□□ 1.13
CCS-208ENST00000533244 RHOBTB2Q9BYZ6 727 aa22.11■■□□□ 1.13
CCS-208ENST00000533244 TRAF3IP3Q9Y228 551 aa22.11■■□□□ 1.13
CCS-208ENST00000533244 CDY1Q9Y6F8 540 aa22.11■■□□□ 1.13
CCS-208ENST00000533244 TSC2P49815 1807 aa22.1■■□□□ 1.13
CCS-208ENST00000533244 C19orf67A6NJJ6 358 aa22.1■■□□□ 1.13
CCS-208ENST00000533244 TYMPP19971 482 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms