RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 DERAQ9Y315 318 aa32.9■■■□□ 2.86
SSSCA1-207ENST00000533115 CLUHO75153 1309 aa32.9■■■□□ 2.86
SSSCA1-207ENST00000533115 H7C4K7 107 aa32.89■■■□□ 2.86
SSSCA1-207ENST00000533115 C8AP07357 584 aa32.89■■■□□ 2.86
SSSCA1-207ENST00000533115 GUCY2FP51841 1108 aa32.89■■■□□ 2.86
SSSCA1-207ENST00000533115 POU5F1Q01860 360 aaKnown RBP32.89■■■□□ 2.86
SSSCA1-207ENST00000533115 MRPL58Q14197 206 aaKnown RBP32.89■■■□□ 2.86
SSSCA1-207ENST00000533115 PPM1LQ5SGD2 360 aa32.89■■■□□ 2.86
SSSCA1-207ENST00000533115 SPATA1Q5VX52 437 aa32.89■■■□□ 2.86
SSSCA1-207ENST00000533115 SLC8B1Q6J4K2 584 aa32.89■■■□□ 2.86
SSSCA1-207ENST00000533115 TRIM67Q6ZTA4 783 aa32.89■■■□□ 2.86
SSSCA1-207ENST00000533115 SYCP3Q8IZU3 236 aa32.89■■■□□ 2.86
SSSCA1-207ENST00000533115 BEST2Q8NFU1 509 aa32.89■■■□□ 2.86
SSSCA1-207ENST00000533115 ASB7Q9H672 318 aa32.89■■■□□ 2.86
SSSCA1-207ENST00000533115 MAGEF1Q9HAY2 307 aa32.89■■■□□ 2.86
SSSCA1-207ENST00000533115 LIMD1Q9UGP4 676 aa32.89■■■□□ 2.86
SSSCA1-207ENST00000533115 PCDHB8Q9UN66 801 aa32.89■■■□□ 2.86
SSSCA1-207ENST00000533115 TBC1D4O60343 1298 aa32.88■■■□□ 2.85
SSSCA1-207ENST00000533115 HNRNPA1P09651 372 aaKnown RBP eCLIP32.88■■■□□ 2.85
SSSCA1-207ENST00000533115 TMEM132DQ14C87 1099 aa32.88■■■□□ 2.85
SSSCA1-207ENST00000533115 CNNM4Q6P4Q7 775 aa32.88■■■□□ 2.85
SSSCA1-207ENST00000533115 CRELD2Q6UXH1 353 aaPredicted RBP32.88■■■□□ 2.85
SSSCA1-207ENST00000533115 APPL2Q8NEU8 664 aa32.88■■■□□ 2.85
SSSCA1-207ENST00000533115 RAPGEFL1Q9UHV5 662 aa32.88■■■□□ 2.85
SSSCA1-207ENST00000533115 TECTAO75443 2155 aa32.87■■■□□ 2.85
SSSCA1-207ENST00000533115 NFICP08651 508 aa32.87■■■□□ 2.85
SSSCA1-207ENST00000533115 HOXA9P31269 272 aa32.87■■■□□ 2.85
SSSCA1-207ENST00000533115 ASIC1P78348 528 aa32.87■■■□□ 2.85
SSSCA1-207ENST00000533115 UVSSAQ2YD98 709 aa32.87■■■□□ 2.85
SSSCA1-207ENST00000533115 C7orf25Q9BPX7 421 aa32.87■■■□□ 2.85
SSSCA1-207ENST00000533115 TMEM206Q9H813 350 aa32.87■■■□□ 2.85
SSSCA1-207ENST00000533115 SORCS3Q9UPU3 1222 aa32.87■■■□□ 2.85
SSSCA1-207ENST00000533115 M0QZQ0 153 aa32.86■■■□□ 2.85
SSSCA1-207ENST00000533115 PRPF6O94906 941 aaKnown RBP32.86■■■□□ 2.85
SSSCA1-207ENST00000533115 AARSP49588 968 aaKnown RBP eCLIP32.86■■■□□ 2.85
SSSCA1-207ENST00000533115 ROR1Q01973 937 aa32.86■■■□□ 2.85
SSSCA1-207ENST00000533115 SLC7A14Q8TBB6 771 aa32.86■■■□□ 2.85
SSSCA1-207ENST00000533115 FBXL5Q9UKA1 691 aa32.86■■■□□ 2.85
SSSCA1-207ENST00000533115 C2CD2Q9Y426 696 aa32.86■■■□□ 2.85
SSSCA1-207ENST00000533115 ANK1P16157 1881 aa32.85■■■□□ 2.85
SSSCA1-207ENST00000533115 GARTP22102 1010 aa32.85■■■□□ 2.85
SSSCA1-207ENST00000533115 SIGLEC14Q08ET2 396 aa32.85■■■□□ 2.85
SSSCA1-207ENST00000533115 CTXN3Q4LDR2 81 aa32.85■■■□□ 2.85
SSSCA1-207ENST00000533115 HFE2Q6ZVN8 426 aa32.85■■■□□ 2.85
SSSCA1-207ENST00000533115 STXBP4Q6ZWJ1 553 aa32.85■■■□□ 2.85
SSSCA1-207ENST00000533115 RTL10Q7L3V2 364 aa32.85■■■□□ 2.85
SSSCA1-207ENST00000533115 ZNF461Q8TAF7 563 aa32.85■■■□□ 2.85
SSSCA1-207ENST00000533115 HPS3Q969F9 1004 aa32.85■■■□□ 2.85
SSSCA1-207ENST00000533115 PYM1Q9BRP8 204 aaKnown RBP32.85■■■□□ 2.85
SSSCA1-207ENST00000533115 MYO10Q9HD67 2058 aa32.85■■■□□ 2.85
SSSCA1-207ENST00000533115 TMEM221A6NGB7 291 aa32.84■■■□□ 2.85
SSSCA1-207ENST00000533115 M0R296 226 aa32.84■■■□□ 2.85
SSSCA1-207ENST00000533115 PPEF2O14830 753 aa32.84■■■□□ 2.85
SSSCA1-207ENST00000533115 N4BP1O75113 896 aaKnown RBP32.84■■■□□ 2.85
SSSCA1-207ENST00000533115 ASGR2P07307 311 aa32.84■■■□□ 2.85
SSSCA1-207ENST00000533115 MTMR3Q13615 1198 aa32.84■■■□□ 2.85
SSSCA1-207ENST00000533115 ZNF280DQ6N043 979 aa32.84■■■□□ 2.85
SSSCA1-207ENST00000533115 FAM213AQ9BRX8 229 aa32.84■■■□□ 2.85
SSSCA1-207ENST00000533115 KCNH3Q9ULD8 1083 aa32.84■■■□□ 2.85
SSSCA1-207ENST00000533115 WDR27A2RRH5 827 aa32.83■■■□□ 2.85
SSSCA1-207ENST00000533115 CCL16O15467 120 aa32.83■■■□□ 2.85
SSSCA1-207ENST00000533115 XYLBO75191 536 aa32.83■■■□□ 2.85
SSSCA1-207ENST00000533115 ABLIM3O94929 683 aa32.83■■■□□ 2.85
SSSCA1-207ENST00000533115 IL18RAPO95256 599 aa32.83■■■□□ 2.85
SSSCA1-207ENST00000533115 LDHAP00338 332 aaKnown RBP32.83■■■□□ 2.85
SSSCA1-207ENST00000533115 GBP2P32456 591 aaPredicted RBP32.83■■■□□ 2.85
SSSCA1-207ENST00000533115 ARPP19P56211 112 aa32.83■■■□□ 2.85
SSSCA1-207ENST00000533115 KRT85P78386 507 aa32.83■■■□□ 2.85
SSSCA1-207ENST00000533115 C9orf57Q5W0N0 161 aa32.83■■■□□ 2.85
SSSCA1-207ENST00000533115 DSTYKQ6XUX3 929 aa32.83■■■□□ 2.85
SSSCA1-207ENST00000533115 GLIS3Q8NEA6 775 aa32.83■■■□□ 2.85
SSSCA1-207ENST00000533115 LEO1Q8WVC0 666 aaPredicted RBP32.83■■■□□ 2.85
SSSCA1-207ENST00000533115 SAAL1Q96ER3 474 aa32.83■■■□□ 2.85
SSSCA1-207ENST00000533115 POU2F2P09086 479 aa32.82■■■□□ 2.84
SSSCA1-207ENST00000533115 GRASPQ7Z6J2 395 aaPredicted RBP32.82■■■□□ 2.84
SSSCA1-207ENST00000533115 UBALD2Q8IYN6 164 aa32.82■■■□□ 2.84
SSSCA1-207ENST00000533115 ZSWIM2Q8NEG5 633 aa32.82■■■□□ 2.84
SSSCA1-207ENST00000533115 CHAMP1Q96JM3 812 aa32.82■■■□□ 2.84
SSSCA1-207ENST00000533115 SPATA32Q96LK8 384 aa32.82■■■□□ 2.84
SSSCA1-207ENST00000533115 HCN4Q9Y3Q4 1203 aa32.82■■■□□ 2.84
SSSCA1-207ENST00000533115 ANO9A1A5B4 782 aa32.81■■■□□ 2.84
SSSCA1-207ENST00000533115 PIRO00625 290 aa32.81■■■□□ 2.84
SSSCA1-207ENST00000533115 PAX3P23760 479 aa32.81■■■□□ 2.84
SSSCA1-207ENST00000533115 LILRA4P59901 499 aa32.81■■■□□ 2.84
SSSCA1-207ENST00000533115 YWHAHQ04917 246 aaPredicted RBP32.81■■■□□ 2.84
SSSCA1-207ENST00000533115 UNC13DQ70J99 1090 aa32.81■■■□□ 2.84
SSSCA1-207ENST00000533115 BMP8AQ7Z5Y6 402 aa32.81■■■□□ 2.84
SSSCA1-207ENST00000533115 MYADMQ96S97 322 aa32.81■■■□□ 2.84
SSSCA1-207ENST00000533115 CBWD1Q9BRT8 395 aa32.81■■■□□ 2.84
SSSCA1-207ENST00000533115 BLZF1Q9H2G9 400 aa32.81■■■□□ 2.84
SSSCA1-207ENST00000533115 POLIQ9UNA4 740 aa32.81■■■□□ 2.84
SSSCA1-207ENST00000533115 TIMM13Q9Y5L4 95 aaPredicted RBP32.81■■■□□ 2.84
SSSCA1-207ENST00000533115 OAZ2O95190 189 aa32.8■■■□□ 2.84
SSSCA1-207ENST00000533115 ATF2P15336 505 aa32.8■■■□□ 2.84
SSSCA1-207ENST00000533115 CASP1P29466 404 aa32.8■■■□□ 2.84
SSSCA1-207ENST00000533115 ELF1P32519 619 aa32.8■■■□□ 2.84
SSSCA1-207ENST00000533115 FAM26FQ5R3K3 315 aa32.8■■■□□ 2.84
SSSCA1-207ENST00000533115 TPGS2Q68CL5 300 aa32.8■■■□□ 2.84
SSSCA1-207ENST00000533115 NT5DC4Q86YG4 428 aa32.8■■■□□ 2.84
SSSCA1-207ENST00000533115 BRSK2Q8IWQ3 736 aa32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms