RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 RPA1P27694 616 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 HOXC13P31276 330 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 MCM4P33991 863 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 GAS6Q14393 721 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 CCDC6Q16204 474 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 ME3Q16798 604 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 ZNF568Q3ZCX4 644 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 SEZ6Q53EL9 994 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 RNF19BQ6ZMZ0 732 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 NETO1Q8TDF5 533 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 PGLYRP2Q96PD5 576 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 TARS2Q9BW92 718 aaKnown RBP14.28□□□□□ -0.12
COPB1-209ENST00000533096 CDT1Q9H211 546 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 ASAH2Q9NR71 780 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 SLC38A7Q9NVC3 462 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 KIAA1024Q9UPX6 916 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 TNFSF13BQ9Y275 285 aa14.28□□□□□ -0.12
COPB1-209ENST00000533096 TIMM13Q9Y5L4 95 aaPredicted RBP14.28□□□□□ -0.12
COPB1-209ENST00000533096 WDR87Q6ZQQ6 2873 aa14.27□□□□□ -0.12
COPB1-209ENST00000533096 SFI1A8K8P3 1242 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 SLC30A4O14863 429 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 AXIN1O15169 862 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 MOSPD3O75425 235 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 MICAL2O94851 1124 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 GRM5P41594 1212 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 CDR1P51861 262 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 SPAG1Q07617 926 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 ANKRD1Q15327 319 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 SAFBQ15424 915 aaKnown RBP eCLIP14.27□□□□□ -0.13
COPB1-209ENST00000533096 ECM1Q16610 540 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 TPGS2Q68CL5 300 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 ALKAL1Q6UXT8 129 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 MFSD6LQ8IWD5 586 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 TMEM130Q8N3G9 435 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 FAM200AQ8TCP9 573 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 KIFAP3Q92845 792 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 ZBTB45Q96K62 511 aaPredicted RBP14.27□□□□□ -0.13
COPB1-209ENST00000533096 ACO2Q99798 780 aaKnown RBP14.27□□□□□ -0.13
COPB1-209ENST00000533096 SLC27A5Q9Y2P5 690 aa14.27□□□□□ -0.13
COPB1-209ENST00000533096 GPR179Q6PRD1 2367 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 A0A1W2PRU2 124 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 SYN3O14994 580 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 EPB41L2O43491 1005 aaKnown RBP14.26□□□□□ -0.13
COPB1-209ENST00000533096 LARGE1O95461 756 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 OR4Q2P0C623 313 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 OR52Z1P0C646 297 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 RPL9P32969 192 aaKnown RBP14.26□□□□□ -0.13
COPB1-209ENST00000533096 MRPL58Q14197 206 aaKnown RBP14.26□□□□□ -0.13
COPB1-209ENST00000533096 CSRP2Q16527 193 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 IL31Q6EBC2 164 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 ZNF280DQ6N043 979 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 MAMSTRQ6ZN01 415 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 PRR23CQ6ZRP0 262 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 SPEM1Q8N4L4 309 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 APPL2Q8NEU8 664 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 DEPDC1BQ8WUY9 529 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 DDX12PQ92771 950 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 RSPRY1Q96DX4 576 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 ZFYVE19Q96K21 471 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 TBC1D32Q96NH3 1257 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 MRPL4Q9BYD3 311 aaKnown RBP14.26□□□□□ -0.13
COPB1-209ENST00000533096 KMT5AQ9NQR1 393 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 AFF4Q9UHB7 1163 aaKnown RBP14.26□□□□□ -0.13
COPB1-209ENST00000533096 CACNA1IQ9P0X4 2223 aa14.26□□□□□ -0.13
COPB1-209ENST00000533096 WDR81Q562E7 1941 aa14.25□□□□□ -0.13
COPB1-209ENST00000533096 DPYSL4O14531 572 aa14.25□□□□□ -0.13
COPB1-209ENST00000533096 MATR3P43243 847 aaKnown RBP eCLIP14.25□□□□□ -0.13
COPB1-209ENST00000533096 NPTX2P47972 431 aa14.25□□□□□ -0.13
COPB1-209ENST00000533096 PXNP49023 591 aaPredicted RBP14.25□□□□□ -0.13
COPB1-209ENST00000533096 DUSP4Q13115 394 aa14.25□□□□□ -0.13
COPB1-209ENST00000533096 LRRC32Q14392 662 aa14.25□□□□□ -0.13
COPB1-209ENST00000533096 Q6ZS52 159 aa14.25□□□□□ -0.13
COPB1-209ENST00000533096 LONP2Q86WA8 852 aa14.25□□□□□ -0.13
COPB1-209ENST00000533096 ARID3BQ8IVW6 561 aaPredicted RBP14.25□□□□□ -0.13
COPB1-209ENST00000533096 NSUN7Q8NE18 718 aaKnown RBP14.25□□□□□ -0.13
COPB1-209ENST00000533096 SHKBP1Q8TBC3 707 aa14.25□□□□□ -0.13
COPB1-209ENST00000533096 ARRDC1-AS1Q9H2J1 176 aa14.25□□□□□ -0.13
COPB1-209ENST00000533096 TRPV5Q9NQA5 729 aa14.25□□□□□ -0.13
COPB1-209ENST00000533096 DDX19AQ9NUU7 478 aaKnown RBP14.25□□□□□ -0.13
COPB1-209ENST00000533096 C2orf42Q9NWW7 574 aa14.25□□□□□ -0.13
COPB1-209ENST00000533096 LRWD1Q9UFC0 647 aa14.25□□□□□ -0.13
COPB1-209ENST00000533096 RALYQ9UKM9 306 aaKnown RBP14.25□□□□□ -0.13
COPB1-209ENST00000533096 CACNA1AO00555 2505 aa14.25□□□□□ -0.13
COPB1-209ENST00000533096 NCOR2Q9Y618 2525 aa14.24□□□□□ -0.13
COPB1-209ENST00000533096 E9PMD0 336 aa14.24□□□□□ -0.13
COPB1-209ENST00000533096 SLC16A4O15374 487 aa14.24□□□□□ -0.13
COPB1-209ENST00000533096 KCNE1P15382 129 aa14.24□□□□□ -0.13
COPB1-209ENST00000533096 ALDH1A3P47895 512 aa14.24□□□□□ -0.13
COPB1-209ENST00000533096 EPHB3P54753 998 aa14.24□□□□□ -0.13
COPB1-209ENST00000533096 PTGDRQ13258 359 aa14.24□□□□□ -0.13
COPB1-209ENST00000533096 PON2Q15165 354 aa14.24□□□□□ -0.13
COPB1-209ENST00000533096 SF3A2Q15428 464 aaKnown RBP14.24□□□□□ -0.13
COPB1-209ENST00000533096 ZRSR1Q15695 479 aaKnown RBP14.24□□□□□ -0.13
COPB1-209ENST00000533096 AASDHQ4L235 1098 aaPredicted RBP14.24□□□□□ -0.13
COPB1-209ENST00000533096 XKR4Q5GH76 650 aa14.24□□□□□ -0.13
COPB1-209ENST00000533096 STXBP5Q5T5C0 1151 aa14.24□□□□□ -0.13
COPB1-209ENST00000533096 USP37Q86T82 979 aa14.24□□□□□ -0.13
COPB1-209ENST00000533096 FAM160A2Q8N612 972 aaPredicted RBP14.24□□□□□ -0.13
COPB1-209ENST00000533096 SUSD3Q96L08 255 aa14.24□□□□□ -0.13
COPB1-209ENST00000533096 GPR88Q9GZN0 384 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms