RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 WDR44Q5JSH3 913 aa15.91■□□□□ 0.14
NXF1-214ENST00000533048 C9orf57Q5W0N0 161 aa15.91■□□□□ 0.14
NXF1-214ENST00000533048 ARHGEF19Q8IW93 802 aa15.91■□□□□ 0.14
NXF1-214ENST00000533048 C7orf61Q8IZ16 206 aa15.91■□□□□ 0.14
NXF1-214ENST00000533048 RNF169Q8NCN4 708 aa15.91■□□□□ 0.14
NXF1-214ENST00000533048 ZNF397Q8NF99 534 aaPredicted RBP15.91■□□□□ 0.14
NXF1-214ENST00000533048 SYN2Q92777 582 aaPredicted RBP15.91■□□□□ 0.14
NXF1-214ENST00000533048 PI4K2AQ9BTU6 479 aa15.91■□□□□ 0.14
NXF1-214ENST00000533048 STK33Q9BYT3 514 aa15.91■□□□□ 0.14
NXF1-214ENST00000533048 APOBEC3GQ9HC16 384 aaKnown RBP15.91■□□□□ 0.14
NXF1-214ENST00000533048 ABHD10Q9NUJ1 306 aa15.91■□□□□ 0.14
NXF1-214ENST00000533048 MIOSQ9NXC5 875 aa15.91■□□□□ 0.14
NXF1-214ENST00000533048 AJAP1Q9UKB5 411 aaPredicted RBP15.91■□□□□ 0.14
NXF1-214ENST00000533048 PCDHB7Q9Y5E2 793 aa15.91■□□□□ 0.14
NXF1-214ENST00000533048 F8VZ95 297 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 TBXAS1P24557 533 aaPredicted RBP15.9■□□□□ 0.14
NXF1-214ENST00000533048 PNPLA4P41247 253 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 GUCY2FP51841 1108 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 FPGSQ05932 587 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 DSC1Q08554 894 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 MEA1Q16626 185 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 ZNF699Q32M78 642 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 NOMO2Q5JPE7 1267 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 PDXDC1Q6P996 788 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 GJB7Q6PEY0 223 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 CACNA2D4Q7Z3S7 1137 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 OR8K1Q8NGG5 319 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 SHC3Q92529 594 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 KREMEN1Q96MU8 473 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 GPR88Q9GZN0 384 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 NIF3L1Q9GZT8 377 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 FAM124BQ9H5Z6 455 aaPredicted RBP15.9■□□□□ 0.14
NXF1-214ENST00000533048 KANSL3Q9P2N6 904 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 DNAJC12Q9UKB3 198 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 NUB1Q9Y5A7 615 aa15.9■□□□□ 0.14
NXF1-214ENST00000533048 TULP1O00294 542 aaPredicted RBP15.89■□□□□ 0.13
NXF1-214ENST00000533048 EVI5O60447 810 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 KRT19P08727 400 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 FGFR1P11362 822 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 RPL9P32969 192 aaKnown RBP15.89■□□□□ 0.13
NXF1-214ENST00000533048 MFAP3P55082 362 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 ADKP55263 362 aaKnown RBP15.89■□□□□ 0.13
NXF1-214ENST00000533048 TUSC3Q13454 348 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 CUL2Q13617 745 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 HS1BP3Q53T59 392 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 SPOPLQ6IQ16 392 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.89■□□□□ 0.13
NXF1-214ENST00000533048 C16orf59Q7L2K0 433 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 FMNL3Q8IVF7 1028 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 LRRC8AQ8IWT6 810 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 TMEM130Q8N3G9 435 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 PPM1KQ8N3J5 372 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 URGCPQ8TCY9 931 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 CPLX3Q8WVH0 158 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 BADQ92934 168 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 TATDN2Q93075 761 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 HPDLQ96IR7 371 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 ZNF560Q96MR9 790 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 UROC1Q96N76 676 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 BCO2Q9BYV7 579 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 UBE2TQ9NPD8 197 aaPredicted RBP15.89■□□□□ 0.13
NXF1-214ENST00000533048 NLRC4Q9NPP4 1024 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 AIPL1Q9NZN9 384 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 AGAP1Q9UPQ3 857 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 PTPRSQ13332 1948 aa15.89■□□□□ 0.13
NXF1-214ENST00000533048 LRRC53A6NM62 1247 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 PPEF2O14830 753 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 PTMAP06454 111 aaKnown RBP15.88■□□□□ 0.13
NXF1-214ENST00000533048 PAX3P23760 479 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 ASPAP45381 313 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 WDR5P61964 334 aaKnown RBP15.88■□□□□ 0.13
NXF1-214ENST00000533048 CDK17Q00537 523 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 LRMPQ12912 555 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 MYO1EQ12965 1108 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 E4F1Q66K89 784 aaPredicted RBP15.88■□□□□ 0.13
NXF1-214ENST00000533048 PSRC1Q6PGN9 363 aaPredicted RBP15.88■□□□□ 0.13
NXF1-214ENST00000533048 RRAGAQ7L523 313 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 TMEM139Q8IV31 216 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 UBR7Q8N806 425 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 CCDC112Q8NEF3 446 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 TOP1MTQ969P6 601 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 DDX27Q96GQ7 796 aaKnown RBP15.88■□□□□ 0.13
NXF1-214ENST00000533048 CASD1Q96PB1 797 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 SPAG5Q96R06 1193 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 MRPL9Q9BYD2 267 aaKnown RBP15.88■□□□□ 0.13
NXF1-214ENST00000533048 RC3H2Q9HBD1 1191 aaKnown RBP15.88■□□□□ 0.13
NXF1-214ENST00000533048 GOLGA2P5Q9HBQ8 144 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 TBC1D13Q9NVG8 400 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 LRFN2Q9ULH4 789 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 CNTN6Q9UQ52 1028 aa15.88■□□□□ 0.13
NXF1-214ENST00000533048 DGKIO75912 1065 aa15.87■□□□□ 0.13
NXF1-214ENST00000533048 POMCP01189 267 aa15.87■□□□□ 0.13
NXF1-214ENST00000533048 AMHP03971 560 aa15.87■□□□□ 0.13
NXF1-214ENST00000533048 GOLGA8FQ08AF8 430 aa15.87■□□□□ 0.13
NXF1-214ENST00000533048 GOLGA8DPQ0D2H9 430 aa15.87■□□□□ 0.13
NXF1-214ENST00000533048 RAPGEF1Q13905 1077 aa15.87■□□□□ 0.13
NXF1-214ENST00000533048 DRAP1Q14919 205 aaPredicted RBP15.87■□□□□ 0.13
NXF1-214ENST00000533048 UPP1Q16831 310 aa15.87■□□□□ 0.13
NXF1-214ENST00000533048 ZNF667Q5HYK9 610 aa15.87■□□□□ 0.13
NXF1-214ENST00000533048 WDR59Q6PJI9 974 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms