RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 CHRNA3P32297 505 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 NAMPTP43490 491 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 PIGHQ14442 188 aaPredicted RBP11.29□□□□□ -0.6
COLCA1-203ENST00000532918 KIF19Q2TAC6 998 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 METTL7BQ6UX53 244 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 TMC7Q7Z402 723 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 TXNRD3Q86VQ6 643 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 ZNF677Q86XU0 584 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 SCFD1Q8WVM8 642 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 CDK5RAP1Q96SZ6 601 aaKnown RBP11.29□□□□□ -0.6
COLCA1-203ENST00000532918 AP1M1Q9BXS5 423 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 EPB41L4AQ9HCS5 686 aaPredicted RBP11.29□□□□□ -0.6
COLCA1-203ENST00000532918 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.29□□□□□ -0.6
COLCA1-203ENST00000532918 UVRAGQ9P2Y5 699 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 CLCA2Q9UQC9 943 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 ANO9A1A5B4 782 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 ANP32DO95626 131 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 ALDH2P05091 517 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 CXCR5P32302 372 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 C2orf54Q08AI8 447 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 PCNX4Q63HM2 1172 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 CRLF3Q8IUI8 442 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 MFN1Q8IWA4 741 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 SPATA16Q9BXB7 569 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 PALMDQ9NP74 551 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 ABHD10Q9NUJ1 306 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 DPP3Q9NY33 737 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 TRPM5Q9NZQ8 1165 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 FAM205AQ6ZU69 1335 aa11.29□□□□□ -0.6
COLCA1-203ENST00000532918 FER1L4A9Z1Z3 1794 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 MTSS1O43312 755 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 GARTP22102 1010 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 RFX5P48382 616 aaPredicted RBP11.28□□□□□ -0.6
COLCA1-203ENST00000532918 CDH18Q13634 790 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 LBRQ14739 615 aaKnown RBP11.28□□□□□ -0.6
COLCA1-203ENST00000532918 FMR1NBQ8N0W7 255 aaPredicted RBP11.28□□□□□ -0.6
COLCA1-203ENST00000532918 BCL2L12Q9HB09 334 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 ABI2Q9NYB9 513 aaPredicted RBP11.28□□□□□ -0.6
COLCA1-203ENST00000532918 KIAA1257Q9ULG3 409 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 CFAP69A5D8W1 941 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 FOXP2O15409 715 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 HADHAP40939 763 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 ATP1A2P50993 1020 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 RABGAP1LQ5R372 815 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 ELOA2Q8IYF1 753 aaPredicted RBP11.28□□□□□ -0.6
COLCA1-203ENST00000532918 TEKT4Q8WW24 435 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 SENP7Q9BQF6 1050 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 AFF4Q9UHB7 1163 aaKnown RBP11.28□□□□□ -0.6
COLCA1-203ENST00000532918 PRPF4O43172 522 aaKnown RBP eCLIP11.28□□□□□ -0.6
COLCA1-203ENST00000532918 CYP26A1O43174 497 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 PPARDQ03181 441 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 MTA1Q13330 715 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 RCN2Q14257 317 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 MTHFD1LQ6UB35 978 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 ACAD11Q709F0 780 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 WDR75Q8IWA0 830 aaKnown RBP11.28□□□□□ -0.6
COLCA1-203ENST00000532918 RTFDC1Q9BY42 306 aaPredicted RBP11.28□□□□□ -0.6
COLCA1-203ENST00000532918 KDM4CQ9H3R0 1056 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 A0A087WUV0 522 aaPredicted RBP11.28□□□□□ -0.6
COLCA1-203ENST00000532918 OGTO15294 1046 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 PQBP1O60828 265 aaKnown RBP11.28□□□□□ -0.6
COLCA1-203ENST00000532918 FMO5P49326 533 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 SF3A3Q12874 501 aaKnown RBP eCLIP11.28□□□□□ -0.6
COLCA1-203ENST00000532918 CTXN3Q4LDR2 81 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 PAN2Q504Q3 1202 aaKnown RBP11.28□□□□□ -0.6
COLCA1-203ENST00000532918 PDXDC1Q6P996 788 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 TRAPPC11Q7Z392 1133 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 KIRREL3Q8IZU9 778 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 CCDC197Q8NCU1 140 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 NKX2-3Q8TAU0 364 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 SPDL1Q96EA4 605 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 CNTNAP5Q8WYK1 1306 aa11.28□□□□□ -0.6
COLCA1-203ENST00000532918 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.27□□□□□ -0.6
COLCA1-203ENST00000532918 NPHP3-ACAD11A0A0J9YXS1 232 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 MAP3K13O43283 966 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 ATP8B1O43520 1251 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 B3GAT3O94766 335 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 HLA-DRAP01903 254 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 THP07101 528 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 MBL2P11226 248 aaPredicted RBP11.27□□□□□ -0.6
COLCA1-203ENST00000532918 ZNF177Q13360 481 aaPredicted RBP11.27□□□□□ -0.6
COLCA1-203ENST00000532918 TRIM60Q495X7 471 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 ALS2CLQ60I27 953 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 FBXO28Q9NVF7 368 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 SLC25A13Q9UJS0 675 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 FBXO2Q9UK22 296 aaPredicted RBP11.27□□□□□ -0.6
COLCA1-203ENST00000532918 GRID2IPA4D2P6 1211 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 H0Y626 953 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 ZC3H11AO75152 810 aaKnown RBP eCLIP11.27□□□□□ -0.6
COLCA1-203ENST00000532918 GUCY1A2P33402 732 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 RGS7P49802 495 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 KPNA1P52294 538 aaPredicted RBP11.27□□□□□ -0.6
COLCA1-203ENST00000532918 DEFB128Q7Z7B8 93 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 KIF2CQ99661 725 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 VPS11Q9H270 941 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 PXMP2Q9NR77 195 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 MAD2L2Q9UI95 211 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 PCDHGB4Q9UN71 923 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 ITSN1Q15811 1721 aa11.27□□□□□ -0.6
COLCA1-203ENST00000532918 MYPNQ86TC9 1320 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms