RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 PPP2R3AQ06190 1150 aa18.33■□□□□ 0.52
CPSF1-207ENST00000531727 SPAG1Q07617 926 aa18.33■□□□□ 0.52
CPSF1-207ENST00000531727 MCM6Q14566 821 aa18.33■□□□□ 0.52
CPSF1-207ENST00000531727 KARSQ15046 597 aaKnown RBP18.33■□□□□ 0.52
CPSF1-207ENST00000531727 ZBTB6Q15916 424 aa18.33■□□□□ 0.52
CPSF1-207ENST00000531727 SLC5A9Q2M3M2 681 aa18.33■□□□□ 0.52
CPSF1-207ENST00000531727 TPGS2Q68CL5 300 aa18.33■□□□□ 0.52
CPSF1-207ENST00000531727 ZNF280DQ6N043 979 aa18.33■□□□□ 0.52
CPSF1-207ENST00000531727 ASCL5Q7RTU5 278 aa18.33■□□□□ 0.52
CPSF1-207ENST00000531727 FRMD5Q7Z6J6 570 aa18.33■□□□□ 0.52
CPSF1-207ENST00000531727 RAD54LQ92698 747 aa18.33■□□□□ 0.52
CPSF1-207ENST00000531727 KIF12Q96FN5 646 aa18.33■□□□□ 0.52
CPSF1-207ENST00000531727 KXD1Q9BQD3 176 aa18.33■□□□□ 0.52
CPSF1-207ENST00000531727 CYP4F11Q9HBI6 524 aa18.33■□□□□ 0.52
CPSF1-207ENST00000531727 GDE1Q9NZC3 331 aa18.33■□□□□ 0.52
CPSF1-207ENST00000531727 CACNA1HO95180 2353 aa18.33■□□□□ 0.52
CPSF1-207ENST00000531727 PRR23AA6NEV1 266 aa18.32■□□□□ 0.52
CPSF1-207ENST00000531727 OGTO15294 1046 aa18.32■□□□□ 0.52
CPSF1-207ENST00000531727 TRAK2O60296 914 aa18.32■□□□□ 0.52
CPSF1-207ENST00000531727 FAM189A1O60320 539 aa18.32■□□□□ 0.52
CPSF1-207ENST00000531727 KRT18P05783 430 aaKnown RBP18.32■□□□□ 0.52
CPSF1-207ENST00000531727 CYP3A5P20815 502 aa18.32■□□□□ 0.52
CPSF1-207ENST00000531727 STARD6P59095 220 aa18.32■□□□□ 0.52
CPSF1-207ENST00000531727 CUL4AQ13619 759 aa18.32■□□□□ 0.52
CPSF1-207ENST00000531727 RASSF8Q8NHQ8 419 aa18.32■□□□□ 0.52
CPSF1-207ENST00000531727 SHDQ96IW2 340 aa18.32■□□□□ 0.52
CPSF1-207ENST00000531727 UBQLN1Q9UMX0 589 aaKnown RBP18.32■□□□□ 0.52
CPSF1-207ENST00000531727 SIT1Q9Y3P8 196 aa18.32■□□□□ 0.52
CPSF1-207ENST00000531727 INSL5Q9Y5Q6 135 aa18.32■□□□□ 0.52
CPSF1-207ENST00000531727 DMDP11532 3685 aa18.31■□□□□ 0.52
CPSF1-207ENST00000531727 VPS37CA5D8V6 355 aaPredicted RBP18.31■□□□□ 0.52
CPSF1-207ENST00000531727 LACTBL1A8MY62 500 aa18.31■□□□□ 0.52
CPSF1-207ENST00000531727 M0QZQ0 153 aa18.31■□□□□ 0.52
CPSF1-207ENST00000531727 ADRB2P07550 413 aa18.31■□□□□ 0.52
CPSF1-207ENST00000531727 DCNP07585 359 aaKnown RBP18.31■□□□□ 0.52
CPSF1-207ENST00000531727 CEBPBP17676 345 aa18.31■□□□□ 0.52
CPSF1-207ENST00000531727 MARCKSP29966 332 aaPredicted RBP18.31■□□□□ 0.52
CPSF1-207ENST00000531727 ADCY1Q08828 1119 aa18.31■□□□□ 0.52
CPSF1-207ENST00000531727 ENOX2Q16206 610 aaKnown RBP18.31■□□□□ 0.52
CPSF1-207ENST00000531727 ZBTB41Q5SVQ8 909 aa18.31■□□□□ 0.52
CPSF1-207ENST00000531727 TMEM130Q8N3G9 435 aa18.31■□□□□ 0.52
CPSF1-207ENST00000531727 PJA1Q8NG27 643 aa18.31■□□□□ 0.52
CPSF1-207ENST00000531727 LARP4BQ92615 738 aaKnown RBP18.31■□□□□ 0.52
CPSF1-207ENST00000531727 MCRS1Q96EZ8 462 aa18.31■□□□□ 0.52
CPSF1-207ENST00000531727 TSPAN18Q96SJ8 248 aa18.31■□□□□ 0.52
CPSF1-207ENST00000531727 CORO1BQ9BR76 489 aa18.31■□□□□ 0.52
CPSF1-207ENST00000531727 CCSER1Q9C0I3 900 aa18.31■□□□□ 0.52
CPSF1-207ENST00000531727 RPF1Q9H9Y2 349 aaKnown RBP18.31■□□□□ 0.52
CPSF1-207ENST00000531727 DLGAP2Q9P1A6 1054 aa18.31■□□□□ 0.52
CPSF1-207ENST00000531727 AFF4Q9UHB7 1163 aaKnown RBP18.31■□□□□ 0.52
CPSF1-207ENST00000531727 MAFFQ9ULX9 164 aa18.31■□□□□ 0.52
CPSF1-207ENST00000531727 A0A0B4J269 797 aa18.3■□□□□ 0.52
CPSF1-207ENST00000531727 XPOTO43592 962 aaKnown RBP18.3■□□□□ 0.52
CPSF1-207ENST00000531727 TBCAO75347 108 aaKnown RBP18.3■□□□□ 0.52
CPSF1-207ENST00000531727 ECI2O75521 394 aa18.3■□□□□ 0.52
CPSF1-207ENST00000531727 ABCD1P33897 745 aa18.3■□□□□ 0.52
CPSF1-207ENST00000531727 AARSP49588 968 aaKnown RBP eCLIP18.3■□□□□ 0.52
CPSF1-207ENST00000531727 PFKPQ01813 784 aa18.3■□□□□ 0.52
CPSF1-207ENST00000531727 YWHAHQ04917 246 aaPredicted RBP18.3■□□□□ 0.52
CPSF1-207ENST00000531727 SNW1Q13573 536 aaKnown RBP18.3■□□□□ 0.52
CPSF1-207ENST00000531727 MLF2Q15773 248 aaPredicted RBP18.3■□□□□ 0.52
CPSF1-207ENST00000531727 PRSS36Q5K4E3 855 aa18.3■□□□□ 0.52
CPSF1-207ENST00000531727 SPECC1Q5M775 1068 aa18.3■□□□□ 0.52
CPSF1-207ENST00000531727 SLC39A4Q6P5W5 647 aa18.3■□□□□ 0.52
CPSF1-207ENST00000531727 NKD2Q969F2 451 aaPredicted RBP18.3■□□□□ 0.52
CPSF1-207ENST00000531727 FIZ1Q96SL8 496 aa18.3■□□□□ 0.52
CPSF1-207ENST00000531727 FOXQ1Q9C009 403 aa18.3■□□□□ 0.52
CPSF1-207ENST00000531727 ZHX3Q9H4I2 956 aa18.3■□□□□ 0.52
CPSF1-207ENST00000531727 COL4A3Q01955 1670 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 ZNF197O14709 1029 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 MICAL2O94851 1124 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 OAZ2O95190 189 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 CPB1P15086 417 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 PDCP20941 246 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 DDIT3P35638 169 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 GUCY2FP51841 1108 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 GTF2BQ00403 316 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 PRKCQQ04759 706 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 SLC44A4Q53GD3 710 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 POTEHQ6S545 545 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 RNF19BQ6ZMZ0 732 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 PDZD4Q76G19 769 aaPredicted RBP18.29■□□□□ 0.52
CPSF1-207ENST00000531727 MAP4K3Q8IVH8 894 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 ELMOD1Q8N336 334 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 MSTO1Q9BUK6 570 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 DDX23Q9BUQ8 820 aaKnown RBP18.29■□□□□ 0.52
CPSF1-207ENST00000531727 OXCT2Q9BYC2 517 aaPredicted RBP18.29■□□□□ 0.52
CPSF1-207ENST00000531727 CPSF3Q9UKF6 684 aaKnown RBP18.29■□□□□ 0.52
CPSF1-207ENST00000531727 CLIC4Q9Y696 253 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 MIA3Q5JRA6 1907 aa18.29■□□□□ 0.52
CPSF1-207ENST00000531727 VPS13AQ96RL7 3174 aa18.28■□□□□ 0.52
CPSF1-207ENST00000531727 KANSL1LA0AUZ9 987 aa18.28■□□□□ 0.52
CPSF1-207ENST00000531727 NMT1P30419 496 aaKnown RBP18.28■□□□□ 0.52
CPSF1-207ENST00000531727 PTPAQ15257 358 aa18.28■□□□□ 0.52
CPSF1-207ENST00000531727 SPATA1Q5VX52 437 aa18.28■□□□□ 0.52
CPSF1-207ENST00000531727 CD302Q8IX05 232 aa18.28■□□□□ 0.52
CPSF1-207ENST00000531727 BEST2Q8NFU1 509 aa18.28■□□□□ 0.52
CPSF1-207ENST00000531727 ELSPBP1Q96BH3 223 aa18.28■□□□□ 0.52
CPSF1-207ENST00000531727 TCEAL4Q96EI5 215 aa18.28■□□□□ 0.52
CPSF1-207ENST00000531727 EPSTI1Q96J88 318 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms