RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 HOXD10P28358 340 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 ATICP31939 592 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 ASPAP45381 313 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 TMEM62Q0P6H9 643 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 TRPC3Q13507 836 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 ZBTB6Q15916 424 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 ERCC6LQ2NKX8 1250 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 XKR4Q5GH76 650 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 UBXN11Q5T124 520 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 TAF3Q5VWG9 929 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 ACAD10Q6JQN1 1059 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 NOTUMQ6P988 496 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 ALKAL1Q6UXT8 129 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 CATSPER4Q7RTX7 472 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 CREG2Q8IUH2 290 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 RHOT2Q8IXI1 618 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 RBBP8NLQ8NC74 664 aaPredicted RBP11.7□□□□□ -0.54
SRPRA-205ENST00000531104 SLC35G2Q8TBE7 412 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 PXYLP1Q8TE99 480 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 CTNNBL1Q8WYA6 563 aaPredicted RBP11.7□□□□□ -0.54
SRPRA-205ENST00000531104 OSBPL9Q96SU4 736 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 BCO2Q9BYV7 579 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 CELF4Q9BZC1 486 aaKnown RBP11.7□□□□□ -0.54
SRPRA-205ENST00000531104 IMPG2Q9BZV3 1241 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 THAP2Q9H0W7 228 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 XPNPEP3Q9NQH7 507 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 PCDHB4Q9Y5E5 795 aa11.7□□□□□ -0.54
SRPRA-205ENST00000531104 TMCO5BA8MYB1 307 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 TULP1O00294 542 aaPredicted RBP11.69□□□□□ -0.54
SRPRA-205ENST00000531104 PDE2AO00408 941 aaPredicted RBP11.69□□□□□ -0.54
SRPRA-205ENST00000531104 NCK2O43639 380 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 SRGAP2O75044 1071 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 TRPA1O75762 1119 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 HMGCRP04035 888 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 RPLP2P05387 115 aaKnown RBP11.69□□□□□ -0.54
SRPRA-205ENST00000531104 PRKAR2AP13861 404 aaKnown RBP11.69□□□□□ -0.54
SRPRA-205ENST00000531104 ELNP15502 786 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 CHMP4BP1P59074 171 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 GPC5P78333 572 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 ITIH3Q06033 890 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 CKAP4Q07065 602 aaKnown RBP11.69□□□□□ -0.54
SRPRA-205ENST00000531104 MGAT3Q09327 533 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 TMEM132DQ14C87 1099 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 ZNF699Q32M78 642 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 GDF6Q6KF10 455 aaPredicted RBP11.69□□□□□ -0.54
SRPRA-205ENST00000531104 CXCL17Q6UXB2 119 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 TRIM72Q6ZMU5 477 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 SERINC5Q86VE9 423 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 CD99L2Q8TCZ2 262 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 UBE2Q2Q8WVN8 375 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 RABGGTAQ92696 567 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 GOLGA1Q92805 767 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 SNX27Q96L92 541 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 TSPAN18Q96SJ8 248 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 CCDC94Q9BW85 323 aaPredicted RBP11.69□□□□□ -0.54
SRPRA-205ENST00000531104 EIF2AQ9BY44 585 aaKnown RBP11.69□□□□□ -0.54
SRPRA-205ENST00000531104 FAM124BQ9H5Z6 455 aaPredicted RBP11.69□□□□□ -0.54
SRPRA-205ENST00000531104 ITGA11Q9UKX5 1188 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 COG5Q9UP83 839 aa11.69□□□□□ -0.54
SRPRA-205ENST00000531104 GRIN2DO15399 1336 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 ZNF185O15231 689 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 FTCDO95954 541 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 CALCAP01258 141 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 ASGR1P07306 291 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 NOP2P46087 812 aaKnown RBP11.68□□□□□ -0.54
SRPRA-205ENST00000531104 VEGFBP49765 207 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 NAP1L1P55209 391 aaKnown RBP11.68□□□□□ -0.54
SRPRA-205ENST00000531104 YWHAEP62258 255 aaKnown RBP11.68□□□□□ -0.54
SRPRA-205ENST00000531104 MRPS6P82932 125 aaKnown RBP11.68□□□□□ -0.54
SRPRA-205ENST00000531104 CENPCQ03188 943 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 ELF2Q15723 593 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 KCNA10Q16322 511 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 TMEM270Q6UE05 265 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 NT5DC3Q86UY8 548 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 SYCE1Q8N0S2 351 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 COG1Q8WTW3 980 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 UBXN4Q92575 508 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 RPGRIP1Q96KN7 1286 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 MMS19Q96T76 1030 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 CYP3A43Q9HB55 503 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 OSGEPQ9NPF4 335 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 AVENQ9NQS1 362 aaPredicted RBP11.68□□□□□ -0.54
SRPRA-205ENST00000531104 CISHQ9NSE2 258 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 SEPT11Q9NVA2 429 aaKnown RBP11.68□□□□□ -0.54
SRPRA-205ENST00000531104 SNTG2Q9NY99 539 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 CNTN3Q9P232 1028 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 RNF14Q9UBS8 474 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.68□□□□□ -0.54
SRPRA-205ENST00000531104 DDX20Q9UHI6 824 aaKnown RBP11.68□□□□□ -0.54
SRPRA-205ENST00000531104 PUF60Q9UHX1 559 aaKnown RBP11.68□□□□□ -0.54
SRPRA-205ENST00000531104 GTF3C4Q9UKN8 822 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 TRPV2Q9Y5S1 764 aa11.68□□□□□ -0.54
SRPRA-205ENST00000531104 V9GYY5 206 aaPredicted RBP11.68□□□□□ -0.54
SRPRA-205ENST00000531104 TRIP12Q14669 1992 aaPredicted RBP11.68□□□□□ -0.54
SRPRA-205ENST00000531104 CTAGE15A4D2H0 777 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 BUB1BO60566 1050 aaPredicted RBP11.67□□□□□ -0.54
SRPRA-205ENST00000531104 KIF4AO95239 1232 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 ITGB3P05106 788 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 CTAGE8P0CG41 777 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 H2AFXP16104 143 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms