RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 TPGS2Q68CL5 300 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 ASCL5Q7RTU5 278 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 TMEM130Q8N3G9 435 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 MYCT1Q8N699 235 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 APPL2Q8NEU8 664 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 ING5Q8WYH8 240 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 RAD54LQ92698 747 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 DDX12PQ92771 950 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 PARVGQ9HBI0 331 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 CYP4F11Q9HBI6 524 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 PCDHB8Q9UN66 801 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 K7ENM7 598 aa17.19■□□□□ 0.34
CPSF1-205ENST00000531042 HNRNPDLO14979 420 aaKnown RBP17.19■□□□□ 0.34
CPSF1-205ENST00000531042 STARD6P59095 220 aa17.19■□□□□ 0.34
CPSF1-205ENST00000531042 CUL4AQ13619 759 aa17.19■□□□□ 0.34
CPSF1-205ENST00000531042 KYAT1Q16773 422 aa17.19■□□□□ 0.34
CPSF1-205ENST00000531042 ZNF280DQ6N043 979 aa17.19■□□□□ 0.34
CPSF1-205ENST00000531042 FRMD5Q7Z6J6 570 aa17.19■□□□□ 0.34
CPSF1-205ENST00000531042 MCRS1Q96EZ8 462 aa17.19■□□□□ 0.34
CPSF1-205ENST00000531042 KIF12Q96FN5 646 aa17.19■□□□□ 0.34
CPSF1-205ENST00000531042 KXD1Q9BQD3 176 aa17.19■□□□□ 0.34
CPSF1-205ENST00000531042 GDE1Q9NZC3 331 aa17.19■□□□□ 0.34
CPSF1-205ENST00000531042 UBQLN1Q9UMX0 589 aaKnown RBP17.19■□□□□ 0.34
CPSF1-205ENST00000531042 SIT1Q9Y3P8 196 aa17.19■□□□□ 0.34
CPSF1-205ENST00000531042 INSL5Q9Y5Q6 135 aa17.19■□□□□ 0.34
CPSF1-205ENST00000531042 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.19■□□□□ 0.34
CPSF1-205ENST00000531042 PRR23AA6NEV1 266 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 LACTBL1A8MY62 500 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 M0QZQ0 153 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 OGTO15294 1046 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 TRAK2O60296 914 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 FAM189A1O60320 539 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 KRT18P05783 430 aaKnown RBP17.18■□□□□ 0.34
CPSF1-205ENST00000531042 ADRB2P07550 413 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 DCNP07585 359 aaKnown RBP17.18■□□□□ 0.34
CPSF1-205ENST00000531042 CYP3A5P20815 502 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 MARCKSP29966 332 aaPredicted RBP17.18■□□□□ 0.34
CPSF1-205ENST00000531042 PPP2R3AQ06190 1150 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 ENOX2Q16206 610 aaKnown RBP17.18■□□□□ 0.34
CPSF1-205ENST00000531042 ZBTB41Q5SVQ8 909 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 POTEHQ6S545 545 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 RASSF8Q8NHQ8 419 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 SHDQ96IW2 340 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 FIZ1Q96SL8 496 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 CORO1BQ9BR76 489 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 CCSER1Q9C0I3 900 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 DLGAP2Q9P1A6 1054 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 MAFFQ9ULX9 164 aa17.18■□□□□ 0.34
CPSF1-205ENST00000531042 A0A0B4J269 797 aa17.17■□□□□ 0.34
CPSF1-205ENST00000531042 VPS37CA5D8V6 355 aaPredicted RBP17.17■□□□□ 0.34
CPSF1-205ENST00000531042 CEBPBP17676 345 aa17.17■□□□□ 0.34
CPSF1-205ENST00000531042 DDIT3P35638 169 aa17.17■□□□□ 0.34
CPSF1-205ENST00000531042 AARSP49588 968 aaKnown RBP eCLIP17.17■□□□□ 0.34
CPSF1-205ENST00000531042 ADCY1Q08828 1119 aa17.17■□□□□ 0.34
CPSF1-205ENST00000531042 SNW1Q13573 536 aaKnown RBP17.17■□□□□ 0.34
CPSF1-205ENST00000531042 PRSS36Q5K4E3 855 aa17.17■□□□□ 0.34
CPSF1-205ENST00000531042 SPECC1Q5M775 1068 aa17.17■□□□□ 0.34
CPSF1-205ENST00000531042 PJA1Q8NG27 643 aa17.17■□□□□ 0.34
CPSF1-205ENST00000531042 LARP4BQ92615 738 aaKnown RBP17.17■□□□□ 0.34
CPSF1-205ENST00000531042 TSPAN18Q96SJ8 248 aa17.17■□□□□ 0.34
CPSF1-205ENST00000531042 FOXQ1Q9C009 403 aa17.17■□□□□ 0.34
CPSF1-205ENST00000531042 RPF1Q9H9Y2 349 aaKnown RBP17.17■□□□□ 0.34
CPSF1-205ENST00000531042 AFF4Q9UHB7 1163 aaKnown RBP17.17■□□□□ 0.34
CPSF1-205ENST00000531042 WDR87Q6ZQQ6 2873 aa17.17■□□□□ 0.34
CPSF1-205ENST00000531042 XPOTO43592 962 aaKnown RBP17.16■□□□□ 0.34
CPSF1-205ENST00000531042 TBCAO75347 108 aaKnown RBP17.16■□□□□ 0.34
CPSF1-205ENST00000531042 ECI2O75521 394 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 OAZ2O95190 189 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 NMT1P30419 496 aaKnown RBP17.16■□□□□ 0.34
CPSF1-205ENST00000531042 ABCD1P33897 745 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 GTF2BQ00403 316 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 PFKPQ01813 784 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 PRKCQQ04759 706 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 YWHAHQ04917 246 aaPredicted RBP17.16■□□□□ 0.34
CPSF1-205ENST00000531042 PTPAQ15257 358 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 SLC44A4Q53GD3 710 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 SLC39A4Q6P5W5 647 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 RNF19BQ6ZMZ0 732 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 NKD2Q969F2 451 aaPredicted RBP17.16■□□□□ 0.34
CPSF1-205ENST00000531042 TCEAL4Q96EI5 215 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 EPSTI1Q96J88 318 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 MSTO1Q9BUK6 570 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 DDX23Q9BUQ8 820 aaKnown RBP17.16■□□□□ 0.34
CPSF1-205ENST00000531042 PLA2G2FQ9BZM2 168 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 ZHX3Q9H4I2 956 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 CPSF3Q9UKF6 684 aaKnown RBP17.16■□□□□ 0.34
CPSF1-205ENST00000531042 TIMM13Q9Y5L4 95 aaPredicted RBP17.16■□□□□ 0.34
CPSF1-205ENST00000531042 CLIC4Q9Y696 253 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 COL4A3Q01955 1670 aa17.16■□□□□ 0.34
CPSF1-205ENST00000531042 ZNF197O14709 1029 aa17.15■□□□□ 0.34
CPSF1-205ENST00000531042 MICAL2O94851 1124 aa17.15■□□□□ 0.34
CPSF1-205ENST00000531042 CPB1P15086 417 aa17.15■□□□□ 0.34
CPSF1-205ENST00000531042 GLULP15104 373 aa17.15■□□□□ 0.34
CPSF1-205ENST00000531042 PDCP20941 246 aa17.15■□□□□ 0.34
CPSF1-205ENST00000531042 CCR2P41597 374 aa17.15■□□□□ 0.34
CPSF1-205ENST00000531042 GUCY2FP51841 1108 aa17.15■□□□□ 0.34
CPSF1-205ENST00000531042 TWF1Q12792 350 aa17.15■□□□□ 0.34
CPSF1-205ENST00000531042 MLF2Q15773 248 aaPredicted RBP17.15■□□□□ 0.34
CPSF1-205ENST00000531042 SPATA1Q5VX52 437 aa17.15■□□□□ 0.34
CPSF1-205ENST00000531042 TANGO2Q6ICL3 276 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms