RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PLEKHA7Q6IQ23 1121 aa18.33■□□□□ 0.53
BRCA2-204ENST00000530893 TMEM270Q6UE05 265 aa18.33■□□□□ 0.53
BRCA2-204ENST00000530893 TADA2BQ86TJ2 420 aa18.33■□□□□ 0.53
BRCA2-204ENST00000530893 DDX27Q96GQ7 796 aaKnown RBP18.33■□□□□ 0.53
BRCA2-204ENST00000530893 ZBTB45Q96K62 511 aaPredicted RBP18.33■□□□□ 0.53
BRCA2-204ENST00000530893 ROPN1BQ9BZX4 212 aaPredicted RBP18.33■□□□□ 0.53
BRCA2-204ENST00000530893 SEMA4AQ9H3S1 761 aa18.33■□□□□ 0.53
BRCA2-204ENST00000530893 ROPN1Q9HAT0 212 aaPredicted RBP18.33■□□□□ 0.53
BRCA2-204ENST00000530893 APOBEC3GQ9HC16 384 aaKnown RBP18.33■□□□□ 0.53
BRCA2-204ENST00000530893 ADAM22Q9P0K1 906 aa18.33■□□□□ 0.53
BRCA2-204ENST00000530893 USP2O75604 605 aaPredicted RBP18.33■□□□□ 0.52
BRCA2-204ENST00000530893 CPP00450 1065 aa18.33■□□□□ 0.52
BRCA2-204ENST00000530893 SHBGP04278 402 aa18.33■□□□□ 0.52
BRCA2-204ENST00000530893 KCNJ1P48048 391 aa18.33■□□□□ 0.52
BRCA2-204ENST00000530893 SEC24CP53992 1094 aa18.33■□□□□ 0.52
BRCA2-204ENST00000530893 KRT17Q04695 432 aa18.33■□□□□ 0.52
BRCA2-204ENST00000530893 PTK6Q13882 451 aa18.33■□□□□ 0.52
BRCA2-204ENST00000530893 CAPSQ13938 189 aa18.33■□□□□ 0.52
BRCA2-204ENST00000530893 KCTD19Q17RG1 926 aaPredicted RBP18.33■□□□□ 0.52
BRCA2-204ENST00000530893 SPOPLQ6IQ16 392 aa18.33■□□□□ 0.52
BRCA2-204ENST00000530893 WDR49Q8IV35 697 aa18.33■□□□□ 0.52
BRCA2-204ENST00000530893 BRSK2Q8IWQ3 736 aa18.33■□□□□ 0.52
BRCA2-204ENST00000530893 GPC2Q8N158 579 aa18.33■□□□□ 0.52
BRCA2-204ENST00000530893 RBBP8NLQ8NC74 664 aaPredicted RBP18.33■□□□□ 0.52
BRCA2-204ENST00000530893 SEPT1Q8WYJ6 367 aa18.33■□□□□ 0.52
BRCA2-204ENST00000530893 PCYT2Q99447 389 aa18.33■□□□□ 0.52
BRCA2-204ENST00000530893 PPANQ9NQ55 473 aaKnown RBP18.33■□□□□ 0.52
BRCA2-204ENST00000530893 MEFVO15553 781 aaPredicted RBP18.32■□□□□ 0.52
BRCA2-204ENST00000530893 NCOA4Q13772 614 aa18.32■□□□□ 0.52
BRCA2-204ENST00000530893 SURF1Q15526 300 aa18.32■□□□□ 0.52
BRCA2-204ENST00000530893 METTL7BQ6UX53 244 aa18.32■□□□□ 0.52
BRCA2-204ENST00000530893 KATNAL2Q8IYT4 538 aa18.32■□□□□ 0.52
BRCA2-204ENST00000530893 ATL2Q8NHH9 583 aa18.32■□□□□ 0.52
BRCA2-204ENST00000530893 MPHOSPH6Q99547 160 aaKnown RBP18.32■□□□□ 0.52
BRCA2-204ENST00000530893 PARVAQ9NVD7 372 aa18.32■□□□□ 0.52
BRCA2-204ENST00000530893 SNCAIPQ9Y6H5 919 aa18.32■□□□□ 0.52
BRCA2-204ENST00000530893 UMODL1Q5DID0 1318 aa18.32■□□□□ 0.52
BRCA2-204ENST00000530893 DCDC2CA8MYV0 355 aa18.32■□□□□ 0.52
BRCA2-204ENST00000530893 RGS16O15492 202 aaPredicted RBP18.32■□□□□ 0.52
BRCA2-204ENST00000530893 TOM1L1O75674 476 aa18.32■□□□□ 0.52
BRCA2-204ENST00000530893 MAMLD1Q13495 774 aa18.32■□□□□ 0.52
BRCA2-204ENST00000530893 ZNF568Q3ZCX4 644 aa18.32■□□□□ 0.52
BRCA2-204ENST00000530893 IER5Q5VY09 327 aa18.32■□□□□ 0.52
BRCA2-204ENST00000530893 TCP11Q8WWU5 503 aa18.32■□□□□ 0.52
BRCA2-204ENST00000530893 SNF8Q96H20 258 aa18.32■□□□□ 0.52
BRCA2-204ENST00000530893 MRPL4Q9BYD3 311 aaKnown RBP18.32■□□□□ 0.52
BRCA2-204ENST00000530893 CALCAP01258 141 aa18.31■□□□□ 0.52
BRCA2-204ENST00000530893 TMOD1P28289 359 aa18.31■□□□□ 0.52
BRCA2-204ENST00000530893 MMP13P45452 471 aa18.31■□□□□ 0.52
BRCA2-204ENST00000530893 ZNF132P52740 706 aa18.31■□□□□ 0.52
BRCA2-204ENST00000530893 FSTL1Q12841 308 aa18.31■□□□□ 0.52
BRCA2-204ENST00000530893 KLF1Q13351 362 aaPredicted RBP18.31■□□□□ 0.52
BRCA2-204ENST00000530893 MFSD5Q6N075 450 aa18.31■□□□□ 0.52
BRCA2-204ENST00000530893 KCNV1Q6PIU1 500 aa18.31■□□□□ 0.52
BRCA2-204ENST00000530893 EXD1Q8NHP7 514 aa18.31■□□□□ 0.52
BRCA2-204ENST00000530893 C1orf54Q8WWF1 131 aa18.31■□□□□ 0.52
BRCA2-204ENST00000530893 FAM84AQ96KN4 292 aa18.31■□□□□ 0.52
BRCA2-204ENST00000530893 C11orf70Q9BRQ4 267 aa18.31■□□□□ 0.52
BRCA2-204ENST00000530893 TRIM7Q9C029 511 aa18.31■□□□□ 0.52
BRCA2-204ENST00000530893 DCLK3Q9C098 648 aa18.31■□□□□ 0.52
BRCA2-204ENST00000530893 NUB1Q9Y5A7 615 aa18.31■□□□□ 0.52
BRCA2-204ENST00000530893 C5orf60A6NFR6 353 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 THAP12O43422 761 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 LSM8O95777 96 aaKnown RBP18.3■□□□□ 0.52
BRCA2-204ENST00000530893 ASS1P00966 412 aaKnown RBP18.3■□□□□ 0.52
BRCA2-204ENST00000530893 CETN2P41208 172 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 VGLL4Q14135 290 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 MXD4Q14582 209 aaPredicted RBP18.3■□□□□ 0.52
BRCA2-204ENST00000530893 CCNG2Q16589 344 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 TNFAIP8L3Q5GJ75 292 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 ZBTB41Q5SVQ8 909 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 TREML2Q5T2D2 321 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 CDCA2Q69YH5 1023 aaPredicted RBP18.3■□□□□ 0.52
BRCA2-204ENST00000530893 RHBDF2Q6PJF5 856 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 UBR7Q8N806 425 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 BBOF1Q8ND07 529 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 OR5B17Q8NGF7 314 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 BBXQ8WY36 941 aaPredicted RBP18.3■□□□□ 0.52
BRCA2-204ENST00000530893 RAPGEF5Q92565 580 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 SPATC1LQ9H0A9 340 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 AZI2Q9H6S1 392 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 BTBD7Q9P203 1132 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 ASIC3Q9UHC3 531 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 IP6K2Q9UHH9 426 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 ANKRD65E5RJM6 399 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 MSCO60682 206 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 TCF7P36402 384 aaPredicted RBP18.3■□□□□ 0.52
BRCA2-204ENST00000530893 ERMARDQ5T6L9 678 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 OTUD6BQ8N6M0 293 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 PRPF31Q8WWY3 499 aaKnown RBP18.3■□□□□ 0.52
BRCA2-204ENST00000530893 TRAIPQ9BWF2 469 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 CCDC113Q9H0I3 377 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 CHST7Q9NS84 486 aa18.3■□□□□ 0.52
BRCA2-204ENST00000530893 SOWAHBA6NEL2 793 aa18.29■□□□□ 0.52
BRCA2-204ENST00000530893 TP73O15350 636 aa18.29■□□□□ 0.52
BRCA2-204ENST00000530893 TLR3O15455 904 aaKnown RBP18.29■□□□□ 0.52
BRCA2-204ENST00000530893 FAM189A1O60320 539 aa18.29■□□□□ 0.52
BRCA2-204ENST00000530893 EDN1P05305 212 aa18.29■□□□□ 0.52
BRCA2-204ENST00000530893 CALB1P05937 261 aa18.29■□□□□ 0.52
BRCA2-204ENST00000530893 FGFR4P22455 802 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms