RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 KCNJ1P48048 391 aa16.24■□□□□ 0.19
PCDHA4-203ENST00000530339 FNTAP49354 379 aa16.24■□□□□ 0.19
PCDHA4-203ENST00000530339 ERFP50548 548 aa16.24■□□□□ 0.19
PCDHA4-203ENST00000530339 NFIXQ14938 502 aa16.24■□□□□ 0.19
PCDHA4-203ENST00000530339 FAM102AQ5T9C2 384 aaPredicted RBP16.24■□□□□ 0.19
PCDHA4-203ENST00000530339 SLC4A1P02730 911 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 MOXD1Q6UVY6 613 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 RBM46Q8TBY0 533 aaKnown RBP16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 SENP7Q9BQF6 1050 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 FRMD8Q9BZ67 464 aaPredicted RBP16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 B2RBV5 119 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 ARPP19P56211 112 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 CENPCQ03188 943 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 THTPAQ9BU02 230 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 ZFATQ9P243 1243 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 MYBP10242 640 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 GTF3C2Q8WUA4 911 aaPredicted RBP16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 KRT35Q92764 455 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 IFT43Q96FT9 208 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 TMEM117Q9H0C3 514 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 STK25O00506 426 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 SNX2O60749 519 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 ACADSP16219 412 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 RPA1P27694 616 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 FASTKD5Q7L8L6 764 aaKnown RBP16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 SAMD3Q8N6K7 520 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 SH3TC2Q8TF17 1288 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 IRAK4Q9NWZ3 460 aa16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 CLTCQ00610 1675 aaKnown RBP16.23■□□□□ 0.19
PCDHA4-203ENST00000530339 DIP2AQ14689 1571 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 FAM196BA6NMK8 535 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 PCYT1AP49585 367 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 HDAC4P56524 1084 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 LAMB3Q13751 1172 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 TTI2Q6NXR4 508 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 LVRNQ6Q4G3 990 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 LRRN4CLQ8ND94 238 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 NSL1Q96IY1 281 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 FAM49AQ9H0Q0 323 aaPredicted RBP16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 KDM4CQ9H3R0 1056 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 JCADQ9P266 1359 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 KLHL2O95198 593 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 ZNF200P98182 395 aaPredicted RBP16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 CYTH1Q15438 398 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 LRRC36Q1X8D7 754 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 SLC10A5Q5PT55 438 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 LBHD1Q9BQE6 289 aaPredicted RBP16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 C17orf75Q9HAS0 396 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 ZNF711Q9Y462 761 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 SLIT1O75093 1534 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 DPYSL4O14531 572 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 PPP4CP60510 307 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 MDH1BQ5I0G3 518 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 URGCPQ8TCY9 931 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 NCLNQ969V3 563 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 MMP19Q99542 508 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 TOB1P50616 345 aaPredicted RBP16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 POU5F1BQ06416 359 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 TROAPQ12815 778 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 NKX1-1Q15270 411 aaPredicted RBP16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 TRIP10Q15642 601 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 SGSM1Q2NKQ1 1148 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 POTEAQ6S8J7 498 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 EML4Q9HC35 981 aaKnown RBP16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 KCND1Q9NSA2 647 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 KLHL11Q9NVR0 708 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 STX18Q9P2W9 335 aaKnown RBP16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 ZNF212Q9UDV6 495 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 TECPR2O15040 1411 aa16.22■□□□□ 0.19
PCDHA4-203ENST00000530339 SASH3O75995 380 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 IL18RAPO95256 599 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 IL10P22301 178 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 IFNA8P32881 189 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 ACTR2P61160 394 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 FRA10AC1Q70Z53 315 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 FNDC3AQ9Y2H6 1198 aaKnown RBP16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 MAN1A2O60476 641 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 ANP32DO95626 131 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 AARSP49588 968 aaKnown RBP eCLIP16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 DNAJC3Q13217 504 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 SLC13A5Q86YT5 568 aaPredicted RBP16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 ACTRT1Q8TDG2 376 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 C18orf8Q96DM3 657 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 THAP11Q96EK4 314 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 FRMD8P1Q9BZ68 369 aaPredicted RBP16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 ANKEF1Q9NU02 776 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 ZC3H7BQ9UGR2 993 aaKnown RBP16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 CNTNAP4Q9C0A0 1308 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 TMEM247A6NEH6 219 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 PDHBP11177 359 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 RASA1P20936 1047 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 BTNL9Q6UXG8 535 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 GANCQ8TET4 914 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 CPA5Q8WXQ8 436 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 AGXT2Q9BYV1 514 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 PDP2Q9P2J9 529 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 CPS1P31327 1500 aa16.21■□□□□ 0.19
PCDHA4-203ENST00000530339 SPP2Q13103 211 aa16.21■□□□□ 0.18
PCDHA4-203ENST00000530339 PTK7Q13308 1070 aa16.21■□□□□ 0.18
PCDHA4-203ENST00000530339 EZH2Q15910 746 aaKnown RBP16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms