RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 IWS1Q96ST2 819 aa9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 CDADC1Q9BWV3 514 aa9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 MKRN2Q9H000 416 aaKnown RBP9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 ERVK13-1Q9NX77 482 aa9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 NRBP1Q9UHY1 535 aa9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 BTBD18B2RXH4 712 aa9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 KIF28PB7ZC32 967 aa9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 ADCY6O43306 1168 aa9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 ZNF205O95201 554 aa9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 XBP1P17861 261 aa9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 POLR2BP30876 1174 aaKnown RBP9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 PRAMEF19Q5SWL8 479 aa9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 ARHGEF16Q5VV41 709 aa9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 MFSD14CQ5VZR4 134 aa9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 MCTP2Q6DN12 878 aa9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 FAM184AQ8NB25 1140 aa9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 FEZF2Q8TBJ5 459 aa9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 INPP4AQ96PE3 977 aaPredicted RBP9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 VTA1Q9NP79 307 aa9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 TNFRSF12AQ9NP84 129 aa9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 ACSL6Q9UKU0 697 aa9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 MCM3APO60318 1980 aa9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 RANBP2P49792 3224 aaKnown RBP9.93□□□□□ -0.82
CCDC90B-217ENST00000530253 ADAMTS20P59510 1910 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 GREM1O60565 184 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 CYP3A4P08684 503 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 CCL5P13501 91 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 CCND3P30281 292 aaPredicted RBP9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 KRT2P35908 639 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 ACVR2BQ13705 512 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 CBX2Q14781 532 aaPredicted RBP9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 NR1I3Q14994 352 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 STXBP2Q15833 593 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 SKOR2Q2VWA4 1001 aaPredicted RBP9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 TMEM63BQ5T3F8 832 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 XRRA1Q6P2D8 792 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 IGDCC3Q8IVU1 814 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 NUP43Q8NFH3 380 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 LENG9Q96B70 501 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 PWWP2AQ96N64 755 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 ABHD16BQ9H3Z7 469 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 PDGFCQ9NRA1 345 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 ZHX1Q9UKY1 873 aaPredicted RBP9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 KIF3AQ9Y496 699 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 UBIAD1Q9Y5Z9 338 aa9.92□□□□□ -0.82
CCDC90B-217ENST00000530253 FRMPD3Q5JV73 1810 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 IGLV3-22A0A075B6J6 115 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 NUDT19A8MXV4 375 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 SEPT4O43236 478 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 EIF3JO75822 258 aaKnown RBP9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 ARIH2O95376 493 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 MYCLP12524 364 aaPredicted RBP9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 SYT1P21579 422 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 PTGS1P23219 599 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 U2AF2P26368 475 aaKnown RBP eCLIP9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 CCND2P30279 289 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 CIITAP33076 1130 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 ADCYAP1R1P41586 468 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 TRIM29Q14134 588 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 CCDC62Q6P9F0 684 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 EEPD1Q7L9B9 569 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 FRMD5Q7Z6J6 570 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 TBCKQ8TEA7 893 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 MBOAT7Q96N66 472 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 FOXP1Q9H334 677 aaPredicted RBP9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 FBXL21Q9UKT6 434 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 MTMR6Q9Y217 621 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 CNPY2Q9Y2B0 182 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 PCDHA5Q9Y5H7 936 aa9.91□□□□□ -0.82
CCDC90B-217ENST00000530253 B4DLN1 442 aa9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 FAM86B1E9PN63 330 aa9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 MEIS1O00470 390 aa9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 STAM2O75886 525 aa9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 FAM86B2P0C5J1 330 aa9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 PFKLP17858 780 aa9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 ICAM3P32942 547 aa9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 DDIT3P35638 169 aa9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 BECN1Q14457 450 aa9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 NONOQ15233 471 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 INF2Q27J81 1249 aa9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 CCDC144BQ3MJ40 725 aa9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 LARP1BQ659C4 914 aaKnown RBP9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 PIK3AP1Q6ZUJ8 805 aa9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 CYP2W1Q8TAV3 490 aa9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 MPHOSPH6Q99547 160 aaKnown RBP9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 DDX20Q9UHI6 824 aaKnown RBP9.9□□□□□ -0.82
CCDC90B-217ENST00000530253 MYH7BA7E2Y1 1941 aa9.9□□□□□ -0.83
CCDC90B-217ENST00000530253 KIAA1217Q5T5P2 1943 aa9.9□□□□□ -0.83
CCDC90B-217ENST00000530253 CYP3A7-CYP3A51PA0A087WV96 503 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 CCDC194A0A1B0GVG4 234 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 A0A1W2PQ27 194 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 A0A1W2PQ64 194 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 A0A1W2PQC6 194 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 A0A1W2PQD8 194 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 CTAGE5O15320 804 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 BUB1BO60566 1050 aaPredicted RBP9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 TDP2O95551 362 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 ADRB1P08588 477 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms