RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 DTX1Q86Y01 620 aa8.24□□□□□ -1.09
SVIP-204ENST00000530199 WDR75Q8IWA0 830 aaKnown RBP8.24□□□□□ -1.09
SVIP-204ENST00000530199 ADHFE1Q8IWW8 467 aa8.24□□□□□ -1.09
SVIP-204ENST00000530199 CHPFQ8IZ52 775 aa8.24□□□□□ -1.09
SVIP-204ENST00000530199 ARNTL2Q8WYA1 636 aa8.24□□□□□ -1.09
SVIP-204ENST00000530199 FSD1Q9BTV5 496 aa8.24□□□□□ -1.09
SVIP-204ENST00000530199 SP110Q9HB58 689 aa8.24□□□□□ -1.09
SVIP-204ENST00000530199 AS3MTQ9HBK9 375 aa8.24□□□□□ -1.09
SVIP-204ENST00000530199 ACSS2Q9NR19 701 aa8.24□□□□□ -1.09
SVIP-204ENST00000530199 TOMM22Q9NS69 142 aa8.24□□□□□ -1.09
SVIP-204ENST00000530199 NRBP1Q9UHY1 535 aa8.24□□□□□ -1.09
SVIP-204ENST00000530199 NUB1Q9Y5A7 615 aa8.24□□□□□ -1.09
SVIP-204ENST00000530199 ELP1O95163 1332 aa8.24□□□□□ -1.09
SVIP-204ENST00000530199 ZNF236Q9UL36 1845 aa8.24□□□□□ -1.09
SVIP-204ENST00000530199 ANKRD11Q6UB99 2663 aaPredicted RBP8.24□□□□□ -1.09
SVIP-204ENST00000530199 ZNF292O60281 2723 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 TMEM221A6NGB7 291 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 DDTLA6NHG4 134 aaPredicted RBP8.23□□□□□ -1.09
SVIP-204ENST00000530199 C19orf81C9J6K1 198 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 M0R296 226 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 HGSO14964 777 aaPredicted RBP8.23□□□□□ -1.09
SVIP-204ENST00000530199 PLIN1O60240 522 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 PSPNO60542 156 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 MAFKO60675 156 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 TADA3O75528 432 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 CNMDO75829 334 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 IGHA1P01876 353 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 MYBL2P10244 700 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 RARBP10826 455 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 SPINK2P20155 84 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 RGS3P49796 1198 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 EPHA5P54756 1037 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 RIPK4P57078 832 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 CYP4F8P98187 520 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 NEXNQ0ZGT2 675 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 KSR2Q6VAB6 950 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 LDHAL6AQ6ZMR3 332 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 NFXL1Q6ZNB6 911 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 KCTD1Q719H9 257 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 CABP7Q86V35 215 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 ZNF610Q8N9Z0 462 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 FLCNQ8NFG4 579 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 FUBP3Q96I24 572 aaKnown RBP eCLIP8.23□□□□□ -1.09
SVIP-204ENST00000530199 CCDC136Q96JN2 1154 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 PAGR1Q9BTK6 254 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 SMOC1Q9H4F8 434 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 CERS4Q9HA82 394 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 KCNH7Q9NS40 1196 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 USP40Q9NVE5 1235 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 C19orf73Q9NVV2 129 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 TMOD4Q9NZQ9 345 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 FAM50BQ9Y247 325 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 MAPK8IP3Q9UPT6 1336 aa8.23□□□□□ -1.09
SVIP-204ENST00000530199 FASNP49327 2511 aaKnown RBP8.22□□□□□ -1.09
SVIP-204ENST00000530199 SLC27A2O14975 620 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 STRNO43815 780 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 ADAMTS4O75173 837 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 FRAT2O75474 233 aaPredicted RBP8.22□□□□□ -1.09
SVIP-204ENST00000530199 HPXP02790 462 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 CYP17A1P05093 508 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 PTX3P26022 381 aaPredicted RBP8.22□□□□□ -1.09
SVIP-204ENST00000530199 PPP2R1AP30153 589 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 CD97P48960 835 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 ACLYP53396 1101 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 ST3GAL2Q16842 350 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 BICRALQ6AI39 1079 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 CC2D1AQ6P1N0 951 aaPredicted RBP8.22□□□□□ -1.09
SVIP-204ENST00000530199 FAM126BQ8IXS8 530 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 RBM12BQ8IXT5 1001 aaKnown RBP8.22□□□□□ -1.09
SVIP-204ENST00000530199 RELTQ969Z4 430 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 RMDN1Q96DB5 314 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 SLC13A1Q9BZW2 595 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 ZMAT4Q9H898 229 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 TOPORSQ9NS56 1045 aaPredicted RBP8.22□□□□□ -1.09
SVIP-204ENST00000530199 MUTYHQ9UIF7 546 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 TELO2Q9Y4R8 837 aa8.22□□□□□ -1.09
SVIP-204ENST00000530199 COL4A4P53420 1690 aaPredicted RBP8.21□□□□□ -1.09
SVIP-204ENST00000530199 PI4KAP2A4QPH2 592 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 ABLIM3O94929 683 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 MT-CO1P00395 513 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 PGK1P00558 417 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 GJA4P35212 333 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 GDNFP39905 211 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 TBX4P57082 545 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 ERVFC1P60507 584 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 LRRC32Q14392 662 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 PUM1Q14671 1186 aaKnown RBP eCLIP8.21□□□□□ -1.1
SVIP-204ENST00000530199 TMEM132BQ14DG7 1078 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 TIGD5Q53EQ6 642 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 CAVIN4Q5BKX8 364 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 CCSAPQ6IQ19 270 aaPredicted RBP8.21□□□□□ -1.1
SVIP-204ENST00000530199 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.21□□□□□ -1.1
SVIP-204ENST00000530199 DPP9Q86TI2 863 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 NLRX1Q86UT6 975 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 DCP2Q8IU60 420 aaKnown RBP8.21□□□□□ -1.1
SVIP-204ENST00000530199 PI4KAP1Q8N8J0 262 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 NETO2Q8NC67 525 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 KLHDC9Q8NEP7 349 aa8.21□□□□□ -1.1
SVIP-204ENST00000530199 C1orf162Q8NEQ5 155 aaPredicted RBP8.21□□□□□ -1.1
SVIP-204ENST00000530199 PHOSPHO2Q8TCD6 241 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms