RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 SKIP12755 728 aa15.5■□□□□ 0.07
TTC39A-216ENST00000530004 FERP16591 822 aa15.5■□□□□ 0.07
TTC39A-216ENST00000530004 ATF7P17544 494 aaPredicted RBP15.5■□□□□ 0.07
TTC39A-216ENST00000530004 PIK3CAP42336 1068 aa15.5■□□□□ 0.07
TTC39A-216ENST00000530004 MAGEA10P43363 369 aaPredicted RBP15.5■□□□□ 0.07
TTC39A-216ENST00000530004 SPA17Q15506 151 aa15.5■□□□□ 0.07
TTC39A-216ENST00000530004 SURF1Q15526 300 aa15.5■□□□□ 0.07
TTC39A-216ENST00000530004 ASTE1Q2TB18 679 aaPredicted RBP15.5■□□□□ 0.07
TTC39A-216ENST00000530004 TMEM240Q5SV17 173 aa15.5■□□□□ 0.07
TTC39A-216ENST00000530004 MRPL10Q7Z7H8 261 aaKnown RBP15.5■□□□□ 0.07
TTC39A-216ENST00000530004 TMEM192Q8IY95 271 aa15.5■□□□□ 0.07
TTC39A-216ENST00000530004 PPM1KQ8N3J5 372 aa15.5■□□□□ 0.07
TTC39A-216ENST00000530004 OR5B17Q8NGF7 314 aa15.5■□□□□ 0.07
TTC39A-216ENST00000530004 NT5C1BQ96P26 610 aa15.5■□□□□ 0.07
TTC39A-216ENST00000530004 RNF39Q9H2S5 420 aa15.5■□□□□ 0.07
TTC39A-216ENST00000530004 BZW2Q9Y6E2 419 aaKnown RBP15.5■□□□□ 0.07
TTC39A-216ENST00000530004 ZNF263O14978 683 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 HLA-DRAP01903 254 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 CLTAP09496 248 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 PRKCIP41743 596 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 CYP27A1Q02318 531 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 KYAT1Q16773 422 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.49■□□□□ 0.07
TTC39A-216ENST00000530004 ZNF598Q86UK7 904 aaKnown RBP15.49■□□□□ 0.07
TTC39A-216ENST00000530004 KAT5Q92993 513 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 ACAP3Q96P50 834 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 PI4K2AQ9BTU6 479 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 CCDC94Q9BW85 323 aaPredicted RBP15.49■□□□□ 0.07
TTC39A-216ENST00000530004 ELAC1Q9H777 363 aaKnown RBP15.49■□□□□ 0.07
TTC39A-216ENST00000530004 RPF1Q9H9Y2 349 aaKnown RBP15.49■□□□□ 0.07
TTC39A-216ENST00000530004 SNTG2Q9NY99 539 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 ZC3H11AO75152 810 aaKnown RBP eCLIP15.49■□□□□ 0.07
TTC39A-216ENST00000530004 LCA5LO95447 670 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 EOMESO95936 686 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 CXCL8P10145 99 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 IBSPP21815 317 aaPredicted RBP15.49■□□□□ 0.07
TTC39A-216ENST00000530004 AP3M2P53677 418 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 WDR5P61964 334 aaKnown RBP15.49■□□□□ 0.07
TTC39A-216ENST00000530004 GFPT1Q06210 699 aaPredicted RBP15.49■□□□□ 0.07
TTC39A-216ENST00000530004 ARHGAP29Q52LW3 1261 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 KIAA1328Q86T90 577 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 FMNL3Q8IVF7 1028 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 HACE1Q8IYU2 909 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 CRIPAKQ8N1N5 446 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 HELQQ8TDG4 1101 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 ZNF592Q92610 1267 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 KREMEN1Q96MU8 473 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 APOL6Q9BWW8 343 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 TMEM161AQ9NX61 479 aa15.49■□□□□ 0.07
TTC39A-216ENST00000530004 MEIS3P2A8K0S8 358 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 H0YGN5 161 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 FOXN3O00409 490 aaPredicted RBP15.48■□□□□ 0.07
TTC39A-216ENST00000530004 PHACTR2O75167 634 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 RECQL4O94761 1208 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 VNN1O95497 513 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 ITGA4P13612 1032 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 AKAP5P24588 427 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 ARHGAP25P42331 645 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 ETF1P62495 437 aaKnown RBP15.48■□□□□ 0.07
TTC39A-216ENST00000530004 POU5F1Q01860 360 aaKnown RBP15.48■□□□□ 0.07
TTC39A-216ENST00000530004 PTK2Q05397 1052 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 AGMOQ6ZNB7 445 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 ZNF571Q7Z3V5 609 aaPredicted RBP15.48■□□□□ 0.07
TTC39A-216ENST00000530004 RNF169Q8NCN4 708 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 LPPQ93052 612 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 TATDN2Q93075 761 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 ELMO3Q96BJ8 720 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 PGBD4Q96DM1 585 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.48■□□□□ 0.07
TTC39A-216ENST00000530004 MTMR12Q9C0I1 747 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 PARP2Q9UGN5 583 aa15.48■□□□□ 0.07
TTC39A-216ENST00000530004 MEFVO15553 781 aaPredicted RBP15.47■□□□□ 0.07
TTC39A-216ENST00000530004 IL18RAPO95256 599 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 TUBB4AP04350 444 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 CCDC172P0C7W6 258 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 YARSP54577 528 aaKnown RBP15.47■□□□□ 0.07
TTC39A-216ENST00000530004 MFAP3P55082 362 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 TFAMQ00059 246 aaKnown RBP15.47■□□□□ 0.07
TTC39A-216ENST00000530004 DUOXA2Q1HG44 320 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 WDR44Q5JSH3 913 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 SYT10Q6XYQ8 523 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 EFCAB13Q8IY85 973 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 HERVK_113Q902F9 699 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 TFR2Q9UP52 801 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 PCDHB7Q9Y5E2 793 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 PCDHA13Q9Y5I0 950 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 ZBBXA8MT70 800 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 ABL1P00519 1130 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 AMHP03971 560 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 VAV2P52735 878 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 GNG11P61952 73 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 DEFB103AP81534 67 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 NCOA4Q13772 614 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 SLC18A3Q16572 532 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 SLC10A6Q3KNW5 377 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 TRAPPC11Q7Z392 1133 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 NPAS4Q8IUM7 802 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 TOP1MTQ969P6 601 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 JAKMIP2Q96AA8 810 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 GDF15Q99988 308 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms