RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 TTC30BQ8N4P2 665 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 TBC1D19Q8N5T2 526 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 MSL3Q8N5Y2 521 aaKnown RBP8.93□□□□□ -0.98
CTNND1-221ENST00000529873 KRT35Q92764 455 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 BTBD6Q96KE9 485 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 MCEEQ96PE7 176 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 TEX13BQ9BXU2 312 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 XPO7Q9UIA9 1087 aaKnown RBP8.93□□□□□ -0.98
CTNND1-221ENST00000529873 CD163L1Q9NR16 1453 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 ESYT3A0FGR9 886 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 MYO1CO00159 1063 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 MAGEB2O15479 319 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 TADA2AO75478 443 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 NCOA4Q13772 614 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 LRRC8EQ6NSJ5 796 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 RBBP8NLQ8NC74 664 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-221ENST00000529873 CHST13Q8NET6 341 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 ING2Q9H160 280 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 PRDM5Q9NQX1 630 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-221ENST00000529873 SENP1Q9P0U3 644 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 DCTN4Q9UJW0 460 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 ITGB1BP2Q9UKP3 347 aa8.93□□□□□ -0.98
CTNND1-221ENST00000529873 PTPRMP28827 1452 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 PITPNM2Q9BZ72 1349 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 PDAP1Q13442 181 aaKnown RBP8.92□□□□□ -0.98
CTNND1-221ENST00000529873 IER5Q5VY09 327 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 ZNF677Q86XU0 584 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 SPON2Q9BUD6 331 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 SNX12Q9UMY4 172 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 KIF20BQ96Q89 1820 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 PSMD14O00487 310 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 KRT75O95678 551 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 NDUFB10O96000 172 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 ITGA4P13612 1032 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 SERPINB9P50453 376 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 FXR2P51116 673 aaKnown RBP eCLIP8.92□□□□□ -0.982e-8■■■□□ 16.9
CTNND1-221ENST00000529873 DAB2P98082 770 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 PRKCEQ02156 737 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 GRIN1Q05586 938 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 CACNB2Q08289 660 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-221ENST00000529873 CUL3Q13618 768 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 BAATQ14032 418 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-221ENST00000529873 GOLGA7BQ2TAP0 167 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 STX19Q8N4C7 294 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 ICA1LQ8NDH6 482 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.92□□□□□ -0.983e-6■■■■■ 50.8
CTNND1-221ENST00000529873 ARL8AQ96BM9 186 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 NAF1Q96HR8 494 aaKnown RBP8.92□□□□□ -0.98
CTNND1-221ENST00000529873 FAM161BQ96MY7 647 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 TMEM8AQ9HCN3 771 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 MAD2L2Q9UI95 211 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 CNTNAP5Q8WYK1 1306 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 KIAA1210Q9ULL0 1709 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 CHUKO15111 745 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 NTSR2O95665 410 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 ALDH1A1P00352 501 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 CHGBP05060 677 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 PDHBP11177 359 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 ITIH2P19823 946 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 ATF7IP2Q5U623 682 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 KLHL23Q8NBE8 558 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 TEKT4Q8WW24 435 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 SEPT1Q8WYJ6 367 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 MLXIPLQ9NP71 852 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 EHD2Q9NZN4 543 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-221ENST00000529873 SMG5Q9UPR3 1016 aaKnown RBP8.92□□□□□ -0.98
CTNND1-221ENST00000529873 IQSEC2Q5JU85 1478 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 C3orf70A6NLC5 250 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-221ENST00000529873 KCNA2P16389 499 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 HLA-DPA1P20036 260 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 CYP2C19P33261 490 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 MAP3K10Q02779 954 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 LRRC14Q15048 493 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 BARGINQ6ZT62 677 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 PARP9Q8IXQ6 854 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 CATSPER1Q8NEC5 780 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 MRPS26Q9BYN8 205 aaKnown RBP8.92□□□□□ -0.98
CTNND1-221ENST00000529873 WWP1Q9H0M0 922 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 PPCSQ9HAB8 311 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 STOML1Q9UBI4 398 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 PRR12Q9ULL5 1215 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 ZDHHC9Q9Y397 364 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 CNTNAP4Q9C0A0 1308 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 DIP2CQ9Y2E4 1556 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 DEAF1O75398 565 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-221ENST00000529873 SERPINB10P48595 397 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 ACOT2P49753 483 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 CPT1AP50416 773 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 FMR1Q06787 632 aaKnown RBP eCLIP8.92□□□□□ -0.981e-6■■■■□ 23.3
CTNND1-221ENST00000529873 KRT72Q14CN4 511 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 TERF2Q15554 542 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 XRRA1Q6P2D8 792 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 RASGRP2Q7LDG7 609 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 ELOA2Q8IYF1 753 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-221ENST00000529873 OR6P1Q8NGX9 317 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 SCFD1Q8WVM8 642 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 NR1H4Q96RI1 486 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-221ENST00000529873 TRABDQ9H4I3 376 aa8.92□□□□□ -0.98
CTNND1-221ENST00000529873 VCPKMTQ9H867 229 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms