RNA–Protein interactions for RNA: ENST00000529430.1

CLP1-203, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 5 BASIC

Gene CLP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-203ENST00000529430 MAFO75444 373 aaPredicted RBP12.61□□□□□ -0.39
CLP1-203ENST00000529430 HSD17B3P37058 310 aa12.61□□□□□ -0.39
CLP1-203ENST00000529430 LIG3P49916 1009 aa12.61□□□□□ -0.39
CLP1-203ENST00000529430 NLRP11P59045 1033 aaKnown RBP12.61□□□□□ -0.39
CLP1-203ENST00000529430 PDCLQ13371 301 aa12.61□□□□□ -0.39
CLP1-203ENST00000529430 ZNF211Q13398 564 aaPredicted RBP12.61□□□□□ -0.39
CLP1-203ENST00000529430 SURF1Q15526 300 aa12.61□□□□□ -0.39
CLP1-203ENST00000529430 TRADDQ15628 312 aa12.61□□□□□ -0.39
CLP1-203ENST00000529430 SWT1Q5T5J6 900 aaKnown RBP12.61□□□□□ -0.39
CLP1-203ENST00000529430 LIN9Q5TKA1 542 aa12.61□□□□□ -0.39
CLP1-203ENST00000529430 DUPD1Q68J44 220 aa12.61□□□□□ -0.39
CLP1-203ENST00000529430 CYP4F22Q6NT55 531 aa12.61□□□□□ -0.39
CLP1-203ENST00000529430 C17orf99Q6UX52 265 aa12.61□□□□□ -0.39
CLP1-203ENST00000529430 ATP6V1G3Q96LB4 118 aa12.61□□□□□ -0.39
CLP1-203ENST00000529430 MSTO1Q9BUK6 570 aa12.61□□□□□ -0.39
CLP1-203ENST00000529430 FAM129AQ9BZQ8 928 aa12.61□□□□□ -0.39
CLP1-203ENST00000529430 VTA1Q9NP79 307 aa12.61□□□□□ -0.39
CLP1-203ENST00000529430 ADGRA2Q96PE1 1338 aa12.6□□□□□ -0.39
CLP1-203ENST00000529430 MYZAPP0CAP1 466 aa12.6□□□□□ -0.39
CLP1-203ENST00000529430 UNGP13051 313 aaPredicted RBP12.6□□□□□ -0.39
CLP1-203ENST00000529430 NR1D1P20393 614 aa12.6□□□□□ -0.39
CLP1-203ENST00000529430 CUL2Q13617 745 aa12.6□□□□□ -0.39
CLP1-203ENST00000529430 TDRD10Q5VZ19 366 aaKnown RBP12.6□□□□□ -0.39
CLP1-203ENST00000529430 NAA35Q5VZE5 725 aa12.6□□□□□ -0.39
CLP1-203ENST00000529430 CRELD2Q6UXH1 353 aaPredicted RBP12.6□□□□□ -0.39
CLP1-203ENST00000529430 DDX42Q86XP3 938 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLP1-203ENST00000529430 FBXO16Q8IX29 292 aaPredicted RBP12.6□□□□□ -0.39
CLP1-203ENST00000529430 MCOLN2Q8IZK6 566 aa12.6□□□□□ -0.39
CLP1-203ENST00000529430 OTUD6BQ8N6M0 293 aa12.6□□□□□ -0.39
CLP1-203ENST00000529430 KRT35Q92764 455 aa12.6□□□□□ -0.39
CLP1-203ENST00000529430 MAGOHBQ96A72 148 aaKnown RBP12.6□□□□□ -0.39
CLP1-203ENST00000529430 VCPIP1Q96JH7 1222 aa12.6□□□□□ -0.39
CLP1-203ENST00000529430 FGD4Q96M96 766 aa12.6□□□□□ -0.39
CLP1-203ENST00000529430 PCYT2Q99447 389 aa12.6□□□□□ -0.39
CLP1-203ENST00000529430 FMO2Q99518 471 aa12.6□□□□□ -0.39
CLP1-203ENST00000529430 PI4K2AQ9BTU6 479 aa12.6□□□□□ -0.39
CLP1-203ENST00000529430 TARS2Q9BW92 718 aaKnown RBP12.6□□□□□ -0.39
CLP1-203ENST00000529430 PCYOX1Q9UHG3 505 aa12.6□□□□□ -0.39
CLP1-203ENST00000529430 MEFVO15553 781 aaPredicted RBP12.59□□□□□ -0.39
CLP1-203ENST00000529430 FSBPO95073 299 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 TXNP10599 105 aaKnown RBP12.59□□□□□ -0.39
CLP1-203ENST00000529430 LSP1P33241 339 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 NSFP46459 744 aaKnown RBP12.59□□□□□ -0.39
CLP1-203ENST00000529430 FNTAP49354 379 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 ACOT2P49753 483 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 APLP1P51693 650 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 EIF3BP55884 814 aaKnown RBP12.59□□□□□ -0.39
CLP1-203ENST00000529430 CRHR2Q13324 411 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 MXD4Q14582 209 aaPredicted RBP12.59□□□□□ -0.39
CLP1-203ENST00000529430 CYP1B1Q16678 543 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 CEP85LQ5SZL2 805 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 PLPPR4Q7Z2D5 763 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 SLC13A5Q86YT5 568 aaPredicted RBP12.59□□□□□ -0.39
CLP1-203ENST00000529430 JAMLQ86YT9 394 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 ZBTB8OSQ8IWT0 167 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 DHX37Q8IY37 1157 aaKnown RBP12.59□□□□□ -0.39
CLP1-203ENST00000529430 CNPY4Q8N129 248 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 C3orf20Q8ND61 904 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 SOCS4Q8WXH5 440 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 MRPL4Q9BYD3 311 aaKnown RBP12.59□□□□□ -0.39
CLP1-203ENST00000529430 CELF4Q9BZC1 486 aaKnown RBP12.59□□□□□ -0.39
CLP1-203ENST00000529430 IMPG2Q9BZV3 1241 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 C2orf40Q9H1Z8 148 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 DPH5Q9H2P9 285 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 TMBIM4Q9HC24 238 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 ACP6Q9NPH0 428 aa12.59□□□□□ -0.39
CLP1-203ENST00000529430 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLP1-203ENST00000529430 TNPO2O14787 897 aaKnown RBP12.58□□□□□ -0.39
CLP1-203ENST00000529430 CLDN3O15551 220 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 KRT14P02533 472 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 CYP1A1P04798 512 aaPredicted RBP12.58□□□□□ -0.39
CLP1-203ENST00000529430 CLTAP09496 248 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 TCF7P36402 384 aaPredicted RBP12.58□□□□□ -0.39
CLP1-203ENST00000529430 MDH1P40925 334 aaKnown RBP12.58□□□□□ -0.39
CLP1-203ENST00000529430 CENPCQ03188 943 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 MAP2K5Q13163 448 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 CAPSQ13938 189 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 PTGISQ16647 500 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 LY6KQ17RY6 165 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 AGBL2Q5U5Z8 902 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 MAMDC4Q6UXC1 1216 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 TMC3Q7Z5M5 1100 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 BRSK2Q8IWQ3 736 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 PRELID2Q8N945 189 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 ZNF784Q8NCA9 323 aaPredicted RBP12.58□□□□□ -0.39
CLP1-203ENST00000529430 MAML3Q96JK9 1138 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 CAPNS2Q96L46 248 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 NEUROG2Q9H2A3 272 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 MRPL47Q9HD33 250 aaKnown RBP12.58□□□□□ -0.39
CLP1-203ENST00000529430 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.58□□□□□ -0.39
CLP1-203ENST00000529430 CNTN6Q9UQ52 1028 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 NR2E1Q9Y466 385 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 PCDHB4Q9Y5E5 795 aa12.58□□□□□ -0.39
CLP1-203ENST00000529430 MYO1FO00160 1098 aa12.58□□□□□ -0.4
CLP1-203ENST00000529430 ATMINO43313 823 aaPredicted RBP12.58□□□□□ -0.4
CLP1-203ENST00000529430 PPFIA2O75334 1257 aa12.58□□□□□ -0.4
CLP1-203ENST00000529430 LGR5O75473 907 aa12.58□□□□□ -0.4
CLP1-203ENST00000529430 TOM1L1O75674 476 aa12.58□□□□□ -0.4
CLP1-203ENST00000529430 VNN1O95497 513 aa12.58□□□□□ -0.4
CLP1-203ENST00000529430 PYGMP11217 842 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms