RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 IL23AQ9NPF7 189 aa6.16□□□□□ -1.42
CSDE1-212ENST00000529046 AASDHPPTQ9NRN7 309 aa6.16□□□□□ -1.42
CSDE1-212ENST00000529046 AURKAIP1Q9NWT8 199 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-212ENST00000529046 TRPS1Q9UHF7 1281 aa6.16□□□□□ -1.42
CSDE1-212ENST00000529046 SERPINB13Q9UIV8 391 aa6.16□□□□□ -1.42
CSDE1-212ENST00000529046 RCAN3Q9UKA8 241 aa6.16□□□□□ -1.42
CSDE1-212ENST00000529046 LUC7L2Q9Y383 392 aaKnown RBP6.16□□□□□ -1.42
CSDE1-212ENST00000529046 SH3BP1Q9Y3L3 701 aa6.16□□□□□ -1.42
CSDE1-212ENST00000529046 UBE2QL1A1L167 161 aa6.15□□□□□ -1.42
CSDE1-212ENST00000529046 XPOTO43592 962 aaKnown RBP6.15□□□□□ -1.42
CSDE1-212ENST00000529046 AKAP5P24588 427 aa6.15□□□□□ -1.42
CSDE1-212ENST00000529046 SEPT2Q15019 361 aa6.15□□□□□ -1.42
CSDE1-212ENST00000529046 CLUL1Q15846 466 aa6.15□□□□□ -1.42
CSDE1-212ENST00000529046 NXNQ6DKJ4 435 aa6.15□□□□□ -1.42
CSDE1-212ENST00000529046 ANKRD35Q8N283 1001 aa6.15□□□□□ -1.42
CSDE1-212ENST00000529046 OR2I1PQ8NGU4 316 aa6.15□□□□□ -1.42
CSDE1-212ENST00000529046 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.15□□□□□ -1.42
CSDE1-212ENST00000529046 IL17DQ8TAD2 202 aa6.15□□□□□ -1.42
CSDE1-212ENST00000529046 TCF25Q9BQ70 676 aa6.15□□□□□ -1.42
CSDE1-212ENST00000529046 ING3Q9NXR8 418 aa6.15□□□□□ -1.42
CSDE1-212ENST00000529046 ZIM2Q9NZV7 527 aa6.15□□□□□ -1.42
CSDE1-212ENST00000529046 ANKRD6Q9Y2G4 727 aa6.15□□□□□ -1.42
CSDE1-212ENST00000529046 SIK3Q9Y2K2 1263 aa6.15□□□□□ -1.42
CSDE1-212ENST00000529046 HS3ST3A1Q9Y663 406 aa6.15□□□□□ -1.42
CSDE1-212ENST00000529046 TRPM3Q9HCF6 1732 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-212ENST00000529046 SRCAPQ6ZRS2 3230 aa6.15□□□□□ -1.43
CSDE1-212ENST00000529046 ALS2Q96Q42 1657 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 NPIPB8E9PQR5 432 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 NRP1O14786 923 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 PLSCR1O15162 318 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 HTRA2O43464 458 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-212ENST00000529046 VCAM1P19320 739 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 CCND1P24385 295 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 CRHR1P34998 444 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 SLC6A9P48067 706 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 CCT2P78371 535 aaKnown RBP6.14□□□□□ -1.43
CSDE1-212ENST00000529046 CRHR2Q13324 411 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 ACAP2Q15057 778 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 SPTY2D1Q68D10 685 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-212ENST00000529046 FAM111BQ6SJ93 734 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 ZFPM1Q8IX07 1006 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 CMTM4Q8IZR5 234 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 PRR18Q8N4B5 295 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 NGDNQ8NEJ9 315 aaKnown RBP6.14□□□□□ -1.43
CSDE1-212ENST00000529046 ZNF480Q8WV37 535 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 HSPBAP1Q96EW2 488 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 SORCS2Q96PQ0 1159 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 PLEKHG4BQ96PX9 1271 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 BCO1Q9HAY6 547 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 DMRT3Q9NQL9 472 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 GPRC5DQ9NZD1 345 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 SPATA31A5Q5VU36 1347 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 SPATA31A7Q8IWB4 1347 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 DISP2A7MBM2 1401 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 ATP7BP35670 1465 aa6.14□□□□□ -1.43
CSDE1-212ENST00000529046 KIAA1210Q9ULL0 1709 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 RGPD8O14715 1765 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-212ENST00000529046 COL14A1Q05707 1796 aaKnown RBP6.13□□□□□ -1.43
CSDE1-212ENST00000529046 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 FAM171A2A8MVW0 826 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 TSPAN6O43657 245 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 C1SP09871 688 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 GYPEP15421 78 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 ZSCAN20P17040 1043 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-212ENST00000529046 GUCY1A2P33402 732 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 DGCR2P98153 550 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 NBPF8Q3BBV2 869 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 RRP12Q5JTH9 1297 aaKnown RBP6.13□□□□□ -1.43
CSDE1-212ENST00000529046 TCEAL8Q8IYN2 117 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 NRG4Q8WWG1 115 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 ARL8AQ96BM9 186 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 MIEF2Q96C03 454 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 AIFM3Q96NN9 605 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 CDK19Q9BWU1 502 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 SLC12A5Q9H2X9 1139 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 NCDNQ9UBB6 729 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 HECAQ9UBI9 543 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-212ENST00000529046 ZNF180Q9UJW8 692 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 LIMCH1Q9UPQ0 1083 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 CPDO75976 1380 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 ABCA3Q99758 1704 aa6.13□□□□□ -1.43
CSDE1-212ENST00000529046 USP19O94966 1318 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 ZNF202O95125 648 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 PARNO95453 639 aaKnown RBP6.12□□□□□ -1.43
CSDE1-212ENST00000529046 SCGB1D2O95969 90 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 SLPIP03973 132 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 POU2F2P09086 479 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 GSPT1P15170 499 aaKnown RBP6.12□□□□□ -1.43
CSDE1-212ENST00000529046 SREBF1P36956 1147 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 SLC16A1P53985 500 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 LRRC41Q15345 812 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 ELAVL1Q15717 326 aaKnown RBP6.12□□□□□ -1.43
CSDE1-212ENST00000529046 LSM12Q3MHD2 195 aaKnown RBP6.12□□□□□ -1.43
CSDE1-212ENST00000529046 PLCH1Q4KWH8 1693 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 FKBP15Q5T1M5 1219 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 FAM102BQ5T8I3 360 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 SPATA31A1Q5TZJ5 1347 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 ATRNL1Q5VV63 1379 aa6.12□□□□□ -1.43
CSDE1-212ENST00000529046 CXorf57Q6NSI4 855 aaKnown RBP6.12□□□□□ -1.43
CSDE1-212ENST00000529046 FAM180AQ6UWF9 173 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms