RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 SPATA31C1P0DKV0 1188 aa20.87■□□□□ 0.93
SSRP1-204ENST00000529002 ATP2B1P20020 1258 aa20.87■□□□□ 0.93
SSRP1-204ENST00000529002 TXKP42681 527 aa20.87■□□□□ 0.93
SSRP1-204ENST00000529002 SHC2P98077 582 aa20.87■□□□□ 0.93
SSRP1-204ENST00000529002 TWF1Q12792 350 aa20.87■□□□□ 0.93
SSRP1-204ENST00000529002 MAPK6Q16659 721 aa20.87■□□□□ 0.93
SSRP1-204ENST00000529002 NT5DC1Q5TFE4 455 aa20.87■□□□□ 0.93
SSRP1-204ENST00000529002 TMEM130Q8N3G9 435 aa20.87■□□□□ 0.93
SSRP1-204ENST00000529002 DEPDC1BQ8WUY9 529 aa20.87■□□□□ 0.93
SSRP1-204ENST00000529002 DDX1Q92499 740 aaKnown RBP20.87■□□□□ 0.93
SSRP1-204ENST00000529002 ZNF274Q96GC6 653 aaPredicted RBP20.87■□□□□ 0.93
SSRP1-204ENST00000529002 FBXL5Q9UKA1 691 aa20.87■□□□□ 0.93
SSRP1-204ENST00000529002 SMIM28A0A1B0GU29 152 aa20.86■□□□□ 0.93
SSRP1-204ENST00000529002 TRAPPC3O43617 180 aa20.86■□□□□ 0.93
SSRP1-204ENST00000529002 MICAL2O94851 1124 aa20.86■□□□□ 0.93
SSRP1-204ENST00000529002 CNR2P34972 360 aa20.86■□□□□ 0.93
SSRP1-204ENST00000529002 KPNA1P52294 538 aaPredicted RBP20.86■□□□□ 0.93
SSRP1-204ENST00000529002 OSTNP61366 133 aa20.86■□□□□ 0.93
SSRP1-204ENST00000529002 CALCRLQ16602 461 aa20.86■□□□□ 0.93
SSRP1-204ENST00000529002 FAM177A1Q8N128 213 aaPredicted RBP20.86■□□□□ 0.93
SSRP1-204ENST00000529002 SHKBP1Q8TBC3 707 aa20.86■□□□□ 0.93
SSRP1-204ENST00000529002 CSGALNACT1Q8TDX6 532 aa20.86■□□□□ 0.93
SSRP1-204ENST00000529002 ZFYVE19Q96K21 471 aa20.86■□□□□ 0.93
SSRP1-204ENST00000529002 ZNF512Q96ME7 567 aaPredicted RBP20.86■□□□□ 0.93
SSRP1-204ENST00000529002 LRRC3BQ96PB8 259 aa20.86■□□□□ 0.93
SSRP1-204ENST00000529002 NAP1L4Q99733 375 aaKnown RBP20.86■□□□□ 0.93
SSRP1-204ENST00000529002 SH2B1Q9NRF2 756 aaPredicted RBP20.86■□□□□ 0.93
SSRP1-204ENST00000529002 C1QTNF9BB2RNN3 333 aa20.85■□□□□ 0.93
SSRP1-204ENST00000529002 PAPSS2O95340 614 aaPredicted RBP20.85■□□□□ 0.93
SSRP1-204ENST00000529002 C1QTNF9P0C862 333 aa20.85■□□□□ 0.93
SSRP1-204ENST00000529002 LIMK1P53667 647 aa20.85■□□□□ 0.93
SSRP1-204ENST00000529002 LRRC32Q14392 662 aa20.85■□□□□ 0.93
SSRP1-204ENST00000529002 PON2Q15165 354 aa20.85■□□□□ 0.93
SSRP1-204ENST00000529002 STXBP5Q5T5C0 1151 aa20.85■□□□□ 0.93
SSRP1-204ENST00000529002 STPG1Q5TH74 334 aa20.85■□□□□ 0.93
SSRP1-204ENST00000529002 PKN3Q6P5Z2 889 aa20.85■□□□□ 0.93
SSRP1-204ENST00000529002 KBTBD6Q86V97 674 aa20.85■□□□□ 0.93
SSRP1-204ENST00000529002 C12orf50Q8NA57 414 aaPredicted RBP20.85■□□□□ 0.93
SSRP1-204ENST00000529002 ZMAT2Q96NC0 199 aaKnown RBP20.85■□□□□ 0.93
SSRP1-204ENST00000529002 C2orf40Q9H1Z8 148 aa20.85■□□□□ 0.93
SSRP1-204ENST00000529002 SLITRK6Q9H5Y7 841 aa20.85■□□□□ 0.93
SSRP1-204ENST00000529002 ZSWIM6Q9HCJ5 1215 aa20.85■□□□□ 0.93
SSRP1-204ENST00000529002 GTSE1Q9NYZ3 720 aa20.85■□□□□ 0.93
SSRP1-204ENST00000529002 ZFYVE26Q68DK2 2539 aa20.85■□□□□ 0.93
SSRP1-204ENST00000529002 NUP210Q8TEM1 1887 aaPredicted RBP20.84■□□□□ 0.93
SSRP1-204ENST00000529002 PODXLO00592 558 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 EXTL3O43909 919 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 MED24O75448 989 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 KCNK5O95279 499 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 PROS1P07225 676 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 SCRN1Q12765 414 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 MRPL58Q14197 206 aaKnown RBP20.84■□□□□ 0.93
SSRP1-204ENST00000529002 DCAF4L1Q3SXM0 396 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 CTXN3Q4LDR2 81 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 IQCEQ6IPM2 695 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 CPLX2Q6PUV4 134 aaKnown RBP20.84■□□□□ 0.93
SSRP1-204ENST00000529002 YAF2Q8IY57 180 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 ELMOD1Q8N336 334 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 MCPH1Q8NEM0 835 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 DEPTORQ8TB45 409 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 TNFRSF25Q93038 417 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 UROC1Q96N76 676 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 TRPV4Q9HBA0 871 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 POLR3BQ9NW08 1133 aaPredicted RBP20.84■□□□□ 0.93
SSRP1-204ENST00000529002 IGF2RP11717 2491 aa20.84■□□□□ 0.93
SSRP1-204ENST00000529002 SPECC1L-ADORA2AF8WAN1 911 aa20.83■□□□□ 0.93
SSRP1-204ENST00000529002 ZNF806P0C7X5 589 aa20.83■□□□□ 0.93
SSRP1-204ENST00000529002 CTHP32929 405 aa20.83■□□□□ 0.93
SSRP1-204ENST00000529002 EPHA5P54756 1037 aa20.83■□□□□ 0.93
SSRP1-204ENST00000529002 ATF7IP2Q5U623 682 aa20.83■□□□□ 0.93
SSRP1-204ENST00000529002 RNF19BQ6ZMZ0 732 aa20.83■□□□□ 0.93
SSRP1-204ENST00000529002 WDR5BQ86VZ2 330 aa20.83■□□□□ 0.93
SSRP1-204ENST00000529002 CATSPER3Q86XQ3 398 aa20.83■□□□□ 0.93
SSRP1-204ENST00000529002 ASAH2Q9NR71 780 aa20.83■□□□□ 0.93
SSRP1-204ENST00000529002 ANK1P16157 1881 aa20.82■□□□□ 0.92
SSRP1-204ENST00000529002 A0A1W2PRU2 124 aa20.82■□□□□ 0.92
SSRP1-204ENST00000529002 CHADO15335 359 aa20.82■□□□□ 0.92
SSRP1-204ENST00000529002 VNN2O95498 520 aa20.82■□□□□ 0.92
SSRP1-204ENST00000529002 XRCC6P12956 609 aaKnown RBP eCLIP20.82■□□□□ 0.92
SSRP1-204ENST00000529002 TCEAL6Q6IPX3 200 aa20.82■□□□□ 0.92
SSRP1-204ENST00000529002 PADI6Q6TGC4 694 aa20.82■□□□□ 0.92
SSRP1-204ENST00000529002 TCEAL3Q969E4 200 aa20.82■□□□□ 0.92
SSRP1-204ENST00000529002 C18orf25Q96B23 403 aaPredicted RBP20.82■□□□□ 0.92
SSRP1-204ENST00000529002 LRRC3Q9BY71 257 aa20.82■□□□□ 0.92
SSRP1-204ENST00000529002 TMEM60Q9H2L4 133 aa20.82■□□□□ 0.92
SSRP1-204ENST00000529002 ZMIZ1Q9ULJ6 1067 aa20.82■□□□□ 0.92
SSRP1-204ENST00000529002 FASNP49327 2511 aaKnown RBP20.82■□□□□ 0.92
SSRP1-204ENST00000529002 NUP205Q92621 2012 aa20.82■□□□□ 0.92
SSRP1-204ENST00000529002 ABCA7Q8IZY2 2146 aa20.81■□□□□ 0.92
SSRP1-204ENST00000529002 ZNF638Q14966 1978 aaKnown RBP20.81■□□□□ 0.92
SSRP1-204ENST00000529002 MYBPHLA2RUH7 354 aa20.81■□□□□ 0.92
SSRP1-204ENST00000529002 H7C4K7 107 aa20.81■□□□□ 0.92
SSRP1-204ENST00000529002 GIPC1O14908 333 aa20.81■□□□□ 0.92
SSRP1-204ENST00000529002 SYN3O14994 580 aa20.81■□□□□ 0.92
SSRP1-204ENST00000529002 FOXD2O60548 495 aaPredicted RBP20.81■□□□□ 0.92
SSRP1-204ENST00000529002 EPN2O95208 641 aa20.81■□□□□ 0.92
SSRP1-204ENST00000529002 OR4Q2P0C623 313 aa20.81■□□□□ 0.92
SSRP1-204ENST00000529002 SPINK2P20155 84 aa20.81■□□□□ 0.92
SSRP1-204ENST00000529002 TNK2Q07912 1038 aa20.81■□□□□ 0.92
SSRP1-204ENST00000529002 DGKKQ5KSL6 1271 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms