RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 PSMC3IPQ9P2W1 217 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-219ENST00000528621 XPO7Q9UIA9 1087 aaKnown RBP8.93□□□□□ -0.98
CTNND1-219ENST00000528621 ARHGAP26Q9UNA1 814 aa8.93□□□□□ -0.98
CTNND1-219ENST00000528621 ESYT3A0FGR9 886 aa8.93□□□□□ -0.98
CTNND1-219ENST00000528621 TADA2AO75478 443 aa8.93□□□□□ -0.98
CTNND1-219ENST00000528621 IL10P22301 178 aa8.93□□□□□ -0.98
CTNND1-219ENST00000528621 TMED1Q13445 227 aa8.93□□□□□ -0.98
CTNND1-219ENST00000528621 NCOA4Q13772 614 aa8.93□□□□□ -0.98
CTNND1-219ENST00000528621 LRRC8EQ6NSJ5 796 aa8.93□□□□□ -0.98
CTNND1-219ENST00000528621 RBBP8NLQ8NC74 664 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-219ENST00000528621 ICA1LQ8NDH6 482 aa8.93□□□□□ -0.98
CTNND1-219ENST00000528621 RMDN2Q96LZ7 410 aa8.93□□□□□ -0.98
CTNND1-219ENST00000528621 ING2Q9H160 280 aa8.93□□□□□ -0.98
CTNND1-219ENST00000528621 PRDM5Q9NQX1 630 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-219ENST00000528621 DCTN4Q9UJW0 460 aa8.93□□□□□ -0.98
CTNND1-219ENST00000528621 MTSS1O43312 755 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 PDHBP11177 359 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 PDAP1Q13442 181 aaKnown RBP8.92□□□□□ -0.98
CTNND1-219ENST00000528621 INPP5AQ14642 412 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 PARP9Q8IXQ6 854 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 OR9Q1Q8NGQ5 310 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 SPON2Q9BUD6 331 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 PRMT7Q9NVM4 692 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-219ENST00000528621 PAK5Q9P286 719 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 SLIT1O75093 1534 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 NDUFB10O96000 172 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 ITGA4P13612 1032 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 ATP6V1E1P36543 226 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 PRKCEQ02156 737 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 CACNB2Q08289 660 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-219ENST00000528621 DYNC1I2Q13409 638 aaKnown RBP8.92□□□□□ -0.98
CTNND1-219ENST00000528621 CUL3Q13618 768 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 BAATQ14032 418 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-219ENST00000528621 GOLGA7BQ2TAP0 167 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 TTC39BQ5VTQ0 682 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-219ENST00000528621 C16orf89Q6UX73 402 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 CD302Q8IX05 232 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 STKLD1Q8NE28 680 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 ARL8AQ96BM9 186 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 NAF1Q96HR8 494 aaKnown RBP8.92□□□□□ -0.98
CTNND1-219ENST00000528621 FAM161BQ96MY7 647 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 EPN3Q9H201 632 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 RSAD1Q9HA92 442 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 MAD2L2Q9UI95 211 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 ARL2BPQ9Y2Y0 163 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 H2AFYO75367 372 aaKnown RBP8.92□□□□□ -0.98
CTNND1-219ENST00000528621 ALDH1A1P00352 501 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 RPLP2P05387 115 aaKnown RBP8.92□□□□□ -0.98
CTNND1-219ENST00000528621 RASA1P20936 1047 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 DNAL1Q4LDG9 190 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 RARS2Q5T160 578 aaKnown RBP8.92□□□□□ -0.98
CTNND1-219ENST00000528621 ATF7IP2Q5U623 682 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 EFL1Q7Z2Z2 1120 aaKnown RBP8.92□□□□□ -0.98
CTNND1-219ENST00000528621 HOMEZQ8IX15 550 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 TEKT4Q8WW24 435 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 TRABDQ9H4I3 376 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 MLXIPLQ9NP71 852 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-219ENST00000528621 NEURL4Q96JN8 1562 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 HBP1O60381 514 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 UCHL3P15374 230 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 KCNA2P16389 499 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 CPT1AP50416 773 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 LRRC14Q15048 493 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 EFHC1Q5JVL4 640 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 AGBL3Q8NEM8 1001 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 PRR12Q9ULL5 1215 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 PREX1Q8TCU6 1659 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 GPR75-ASB3A0A0A6YYF3 556 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 APOA4P06727 396 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 RPA1P27694 616 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 ACOT2P49753 483 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 FMR1Q06787 632 aaKnown RBP eCLIP8.92□□□□□ -0.981e-6■■■■□ 23.3
CTNND1-219ENST00000528621 KRT72Q14CN4 511 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 SPATA21Q7Z572 469 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 TNIP2Q8NFZ5 429 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 OR6P1Q8NGX9 317 aa8.92□□□□□ -0.98
CTNND1-219ENST00000528621 ABTB1Q969K4 478 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-219ENST00000528621 OTUB1Q96FW1 271 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-219ENST00000528621 TLR2O60603 784 aa8.91□□□□□ -0.98
CTNND1-219ENST00000528621 EFCAB14O75071 495 aa8.91□□□□□ -0.98
CTNND1-219ENST00000528621 SYF2O95926 243 aaKnown RBP8.91□□□□□ -0.98
CTNND1-219ENST00000528621 CETPP11597 493 aa8.91□□□□□ -0.98
CTNND1-219ENST00000528621 MAP4P27816 1152 aaKnown RBP8.91□□□□□ -0.98
CTNND1-219ENST00000528621 PDK1Q15118 436 aa8.91□□□□□ -0.98
CTNND1-219ENST00000528621 WDR72Q3MJ13 1102 aa8.91□□□□□ -0.98
CTNND1-219ENST00000528621 SLC30A5Q8TAD4 765 aa8.91□□□□□ -0.98
CTNND1-219ENST00000528621 HPS3Q969F9 1004 aa8.91□□□□□ -0.98
CTNND1-219ENST00000528621 SGSM3Q96HU1 749 aa8.91□□□□□ -0.98
CTNND1-219ENST00000528621 ARHGAP10A1A4S6 786 aa8.91□□□□□ -0.98
CTNND1-219ENST00000528621 MYMKA6NI61 221 aa8.91□□□□□ -0.98
CTNND1-219ENST00000528621 POLRMTO00411 1230 aaKnown RBP8.91□□□□□ -0.98
CTNND1-219ENST00000528621 CYP2C8P10632 490 aa8.91□□□□□ -0.98
CTNND1-219ENST00000528621 GPD1P21695 349 aa8.91□□□□□ -0.98
CTNND1-219ENST00000528621 MDH1P40925 334 aaKnown RBP8.91□□□□□ -0.98
CTNND1-219ENST00000528621 HNRNPH2P55795 449 aaKnown RBP8.91□□□□□ -0.98
CTNND1-219ENST00000528621 PPP4CP60510 307 aa8.91□□□□□ -0.98
CTNND1-219ENST00000528621 PRUNE1Q86TP1 453 aa8.91□□□□□ -0.98
CTNND1-219ENST00000528621 DPF2Q92785 391 aa8.91□□□□□ -0.98
CTNND1-219ENST00000528621 MS4A14Q96JA4 679 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms