RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 N4BP2L1Q5TBK1 243 aaPredicted RBP13.52□□□□□ -0.25
SRPRA-202ENST00000527817 NT5DC1Q5TFE4 455 aa13.52□□□□□ -0.25
SRPRA-202ENST00000527817 IL31Q6EBC2 164 aa13.52□□□□□ -0.25
SRPRA-202ENST00000527817 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.52□□□□□ -0.25
SRPRA-202ENST00000527817 CATSPER3Q86XQ3 398 aa13.52□□□□□ -0.25
SRPRA-202ENST00000527817 HS6ST3Q8IZP7 471 aa13.52□□□□□ -0.25
SRPRA-202ENST00000527817 FAM160A2Q8N612 972 aaPredicted RBP13.52□□□□□ -0.25
SRPRA-202ENST00000527817 BSNDQ8WZ55 320 aa13.52□□□□□ -0.25
SRPRA-202ENST00000527817 TNFRSF25Q93038 417 aa13.52□□□□□ -0.25
SRPRA-202ENST00000527817 GOLGA2P5Q9HBQ8 144 aa13.52□□□□□ -0.25
SRPRA-202ENST00000527817 TUFT1Q9NNX1 390 aa13.52□□□□□ -0.25
SRPRA-202ENST00000527817 CEP72Q9P209 647 aa13.52□□□□□ -0.25
SRPRA-202ENST00000527817 HEPACAM2A8MVW5 462 aa13.51□□□□□ -0.25
SRPRA-202ENST00000527817 CHADO15335 359 aa13.51□□□□□ -0.25
SRPRA-202ENST00000527817 ZNF806P0C7X5 589 aa13.51□□□□□ -0.25
SRPRA-202ENST00000527817 CYP11B2P19099 503 aa13.51□□□□□ -0.25
SRPRA-202ENST00000527817 EFNA5P52803 228 aa13.51□□□□□ -0.25
SRPRA-202ENST00000527817 ARPP19P56211 112 aa13.51□□□□□ -0.25
SRPRA-202ENST00000527817 SOX4Q06945 474 aaPredicted RBP13.51□□□□□ -0.25
SRPRA-202ENST00000527817 SCRN1Q12765 414 aa13.51□□□□□ -0.25
SRPRA-202ENST00000527817 SRSF5Q13243 272 aaKnown RBP13.51□□□□□ -0.25
SRPRA-202ENST00000527817 PPP2R5AQ15172 486 aa13.51□□□□□ -0.25
SRPRA-202ENST00000527817 APBB1IPQ7Z5R6 666 aaPredicted RBP13.51□□□□□ -0.25
SRPRA-202ENST00000527817 WDR5BQ86VZ2 330 aa13.51□□□□□ -0.25
SRPRA-202ENST00000527817 DEPTORQ8TB45 409 aa13.51□□□□□ -0.25
SRPRA-202ENST00000527817 ZSCAN18Q8TBC5 510 aaPredicted RBP13.51□□□□□ -0.25
SRPRA-202ENST00000527817 CSGALNACT1Q8TDX6 532 aa13.51□□□□□ -0.25
SRPRA-202ENST00000527817 LOXL4Q96JB6 756 aa13.51□□□□□ -0.25
SRPRA-202ENST00000527817 POLR3CQ9BUI4 534 aaPredicted RBP13.51□□□□□ -0.25
SRPRA-202ENST00000527817 SLC38A7Q9NVC3 462 aa13.51□□□□□ -0.25
SRPRA-202ENST00000527817 AFF4Q9UHB7 1163 aaKnown RBP13.51□□□□□ -0.25
SRPRA-202ENST00000527817 FBXL5Q9UKA1 691 aa13.51□□□□□ -0.25
SRPRA-202ENST00000527817 TICRRQ7Z2Z1 1910 aa13.51□□□□□ -0.25
SRPRA-202ENST00000527817 FRYQ5TBA9 3013 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 COL4A2P08572 1712 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 MYBPHLA2RUH7 354 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 PODXLO00592 558 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 MYL4P12829 197 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 LIG1P18858 919 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 RPL9P32969 192 aaKnown RBP13.5□□□□□ -0.25
SRPRA-202ENST00000527817 KRT2P35908 639 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 FCHO2Q0JRZ9 810 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 ATF7IP2Q5U623 682 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 PADI6Q6TGC4 694 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 CEP68Q76N32 757 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 CENPQQ7L2Z9 268 aaPredicted RBP13.5□□□□□ -0.25
SRPRA-202ENST00000527817 YAF2Q8IY57 180 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 SYNPOQ8N3V7 929 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 WASF1Q92558 559 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 BRMS1Q9HCU9 246 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 ASAH2Q9NR71 780 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 TOPORSQ9NS56 1045 aaPredicted RBP13.5□□□□□ -0.25
SRPRA-202ENST00000527817 RBM12Q9NTZ6 932 aaKnown RBP13.5□□□□□ -0.25
SRPRA-202ENST00000527817 TNFSF13BQ9Y275 285 aa13.5□□□□□ -0.25
SRPRA-202ENST00000527817 SPAG17Q6Q759 2223 aa13.49□□□□□ -0.25
SRPRA-202ENST00000527817 NEMFO60524 1076 aa13.49□□□□□ -0.25
SRPRA-202ENST00000527817 PFKFB2O60825 505 aa13.49□□□□□ -0.25
SRPRA-202ENST00000527817 MED24O75448 989 aa13.49□□□□□ -0.25
SRPRA-202ENST00000527817 KCNE1P15382 129 aa13.49□□□□□ -0.25
SRPRA-202ENST00000527817 GRM5P41594 1212 aa13.49□□□□□ -0.25
SRPRA-202ENST00000527817 KPNA1P52294 538 aaPredicted RBP13.49□□□□□ -0.25
SRPRA-202ENST00000527817 YARSP54577 528 aaKnown RBP13.49□□□□□ -0.25
SRPRA-202ENST00000527817 TWF1Q12792 350 aa13.49□□□□□ -0.25
SRPRA-202ENST00000527817 TEAD2Q15562 447 aa13.49□□□□□ -0.25
SRPRA-202ENST00000527817 AASDHQ4L235 1098 aaPredicted RBP13.49□□□□□ -0.25
SRPRA-202ENST00000527817 CTXN3Q4LDR2 81 aa13.49□□□□□ -0.25
SRPRA-202ENST00000527817 WDR44Q5JSH3 913 aa13.49□□□□□ -0.25
SRPRA-202ENST00000527817 HEATR6Q6AI08 1181 aaKnown RBP13.49□□□□□ -0.25
SRPRA-202ENST00000527817 RALGPS2Q86X27 583 aaPredicted RBP13.49□□□□□ -0.25
SRPRA-202ENST00000527817 SUSD3Q96L08 255 aa13.49□□□□□ -0.25
SRPRA-202ENST00000527817 IFT74Q96LB3 600 aa13.49□□□□□ -0.25
SRPRA-202ENST00000527817 CCDC94Q9BW85 323 aaPredicted RBP13.49□□□□□ -0.25
SRPRA-202ENST00000527817 PDRG1Q9NUG6 133 aa13.49□□□□□ -0.25
SRPRA-202ENST00000527817 LAMA1P25391 3075 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 NCANO14594 1321 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 CCDC163A0A0D9SF12 145 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 K7ERI5 159 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 AXIN1O15169 862 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 CTDNEP1O95476 244 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 GJA1P17302 382 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 RPA1P27694 616 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 RAP1GAPP47736 663 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 APPL2Q8NEU8 664 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 BEST2Q8NFU1 509 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 SHKBP1Q8TBC3 707 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 RSPRY1Q96DX4 576 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 ZMAT2Q96NC0 199 aaKnown RBP13.48□□□□□ -0.25
SRPRA-202ENST00000527817 ACO2Q99798 780 aaKnown RBP13.48□□□□□ -0.25
SRPRA-202ENST00000527817 LRRC3Q9BY71 257 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 ARRDC1-AS1Q9H2J1 176 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 PTPRHQ9HD43 1115 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 C2orf42Q9NWW7 574 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 ORC3Q9UBD5 711 aaPredicted RBP13.48□□□□□ -0.25
SRPRA-202ENST00000527817 NUB1Q9Y5A7 615 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 GREB1Q4ZG55 1949 aa13.48□□□□□ -0.25
SRPRA-202ENST00000527817 ARHGEF35A5YM69 484 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 SPECC1L-ADORA2AF8WAN1 911 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 WNT7AO00755 349 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 ZZEF1O43149 2961 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 PROS1P07225 676 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms