RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 CD2BP2O95400 341 aaKnown RBP24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 SEC24AO95486 1093 aa24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 KRT18P05783 430 aaKnown RBP24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 PRKCQQ04759 706 aa24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 ADCY1Q08828 1119 aa24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 UBXN2BQ14CS0 331 aa24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 SLC5A9Q2M3M2 681 aa24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 TMEM119Q4V9L6 283 aa24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 CYP4A22Q5TCH4 519 aa24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 IQCEQ6IPM2 695 aa24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 GPBP1Q86WP2 473 aa24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 ZNF512Q96ME7 567 aaPredicted RBP24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 TUBGCP4Q9UGJ1 667 aa24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 FAM186AA6NE01 2351 aa24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 LRRN2O75325 713 aa24.38■■□□□ 1.49
TRAPPC4-208ENST00000527680 FAM13AO94988 1023 aa24.38■■□□□ 1.49
TRAPPC4-208ENST00000527680 CPB1P15086 417 aa24.38■■□□□ 1.49
TRAPPC4-208ENST00000527680 NCKAP1LP55160 1127 aa24.38■■□□□ 1.49
TRAPPC4-208ENST00000527680 FAM212AQ96EL1 285 aa24.38■■□□□ 1.49
TRAPPC4-208ENST00000527680 BCO2Q9BYV7 579 aa24.38■■□□□ 1.49
TRAPPC4-208ENST00000527680 DLGAP2Q9P1A6 1054 aa24.38■■□□□ 1.49
TRAPPC4-208ENST00000527680 ODF2LQ9ULJ1 636 aa24.38■■□□□ 1.49
TRAPPC4-208ENST00000527680 PCDHB8Q9UN66 801 aa24.38■■□□□ 1.49
TRAPPC4-208ENST00000527680 INSL5Q9Y5Q6 135 aa24.38■■□□□ 1.49
TRAPPC4-208ENST00000527680 R4GN57 208 aa24.38■■□□□ 1.49
TRAPPC4-208ENST00000527680 FAM170BA6NMN3 283 aa24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 HNRNPDLO14979 420 aaKnown RBP24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 ECI2O75521 394 aa24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 CEBPBP17676 345 aa24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 PPP2R3AQ06190 1150 aa24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 KYAT1Q16773 422 aa24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 PDZD4Q76G19 769 aaPredicted RBP24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 USP37Q86T82 979 aa24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 REEP2Q9BRK0 252 aa24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 PLA2G2FQ9BZM2 168 aa24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 HAPLN2Q9GZV7 340 aa24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 SEMA4AQ9H3S1 761 aa24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 RPF1Q9H9Y2 349 aaKnown RBP24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 AVENQ9NQS1 362 aaPredicted RBP24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 AFF4Q9UHB7 1163 aaKnown RBP24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 TBX20Q9UMR3 447 aa24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 MYO15AQ9UKN7 3530 aa24.37■■□□□ 1.49
TRAPPC4-208ENST00000527680 TTC26A0AVF1 554 aa24.36■■□□□ 1.49
TRAPPC4-208ENST00000527680 LACTBL1A8MY62 500 aa24.36■■□□□ 1.49
TRAPPC4-208ENST00000527680 K7ENM7 598 aa24.36■■□□□ 1.49
TRAPPC4-208ENST00000527680 SLC26A4O43511 780 aa24.36■■□□□ 1.49
TRAPPC4-208ENST00000527680 XPOTO43592 962 aaKnown RBP24.36■■□□□ 1.49
TRAPPC4-208ENST00000527680 CD72P21854 359 aa24.36■■□□□ 1.49
TRAPPC4-208ENST00000527680 TNFSF9P41273 254 aa24.36■■□□□ 1.49
TRAPPC4-208ENST00000527680 YWHAHQ04917 246 aaPredicted RBP24.36■■□□□ 1.49
TRAPPC4-208ENST00000527680 TANGO2Q6ICL3 276 aa24.36■■□□□ 1.49
TRAPPC4-208ENST00000527680 DSTYKQ6XUX3 929 aa24.36■■□□□ 1.49
TRAPPC4-208ENST00000527680 TMEM130Q8N3G9 435 aa24.36■■□□□ 1.49
TRAPPC4-208ENST00000527680 TCEAL4Q96EI5 215 aa24.36■■□□□ 1.49
TRAPPC4-208ENST00000527680 UBQLN1Q9UMX0 589 aaKnown RBP24.36■■□□□ 1.49
TRAPPC4-208ENST00000527680 TIMM13Q9Y5L4 95 aaPredicted RBP24.36■■□□□ 1.49
TRAPPC4-208ENST00000527680 CFAP54Q96N23 3096 aa24.36■■□□□ 1.49
TRAPPC4-208ENST00000527680 BMP15O95972 392 aa24.35■■□□□ 1.49
TRAPPC4-208ENST00000527680 LMNAP02545 664 aaKnown RBP24.35■■□□□ 1.49
TRAPPC4-208ENST00000527680 GLULP15104 373 aa24.35■■□□□ 1.49
TRAPPC4-208ENST00000527680 TWF1Q12792 350 aa24.35■■□□□ 1.49
TRAPPC4-208ENST00000527680 MCM6Q14566 821 aa24.35■■□□□ 1.49
TRAPPC4-208ENST00000527680 ZC3H14Q6PJT7 736 aaKnown RBP24.35■■□□□ 1.49
TRAPPC4-208ENST00000527680 RNF19BQ6ZMZ0 732 aa24.35■■□□□ 1.49
TRAPPC4-208ENST00000527680 PARVGQ9HBI0 331 aa24.35■■□□□ 1.49
TRAPPC4-208ENST00000527680 ZFP14Q9HCL3 533 aa24.35■■□□□ 1.49
TRAPPC4-208ENST00000527680 SPATA6Q9NWH7 488 aaPredicted RBP24.35■■□□□ 1.49
TRAPPC4-208ENST00000527680 MAFFQ9ULX9 164 aa24.35■■□□□ 1.49
TRAPPC4-208ENST00000527680 MTF2Q9Y483 593 aaPredicted RBP24.35■■□□□ 1.49
TRAPPC4-208ENST00000527680 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.35■■□□□ 1.49
TRAPPC4-208ENST00000527680 CACNA1IQ9P0X4 2223 aa24.35■■□□□ 1.49
TRAPPC4-208ENST00000527680 TRAK2O60296 914 aa24.34■■□□□ 1.49
TRAPPC4-208ENST00000527680 SP9P0CG40 484 aa24.34■■□□□ 1.49
TRAPPC4-208ENST00000527680 MYL4P12829 197 aa24.34■■□□□ 1.49
TRAPPC4-208ENST00000527680 CYP3A5P20815 502 aa24.34■■□□□ 1.49
TRAPPC4-208ENST00000527680 LRPAP1P30533 357 aa24.34■■□□□ 1.49
TRAPPC4-208ENST00000527680 KARSQ15046 597 aaKnown RBP24.34■■□□□ 1.49
TRAPPC4-208ENST00000527680 ZBTB41Q5SVQ8 909 aa24.34■■□□□ 1.49
TRAPPC4-208ENST00000527680 TPRG1Q6ZUI0 275 aa24.34■■□□□ 1.49
TRAPPC4-208ENST00000527680 HS6ST3Q8IZP7 471 aa24.34■■□□□ 1.49
TRAPPC4-208ENST00000527680 ELSPBP1Q96BH3 223 aa24.34■■□□□ 1.49
TRAPPC4-208ENST00000527680 MSTO1Q9BUK6 570 aa24.34■■□□□ 1.49
TRAPPC4-208ENST00000527680 PDCD11Q14690 1871 aaKnown RBP24.34■■□□□ 1.49
TRAPPC4-208ENST00000527680 MIA3Q5JRA6 1907 aa24.33■■□□□ 1.49
TRAPPC4-208ENST00000527680 M0QZQ0 153 aa24.33■■□□□ 1.49
TRAPPC4-208ENST00000527680 OGTO15294 1046 aa24.33■■□□□ 1.49
TRAPPC4-208ENST00000527680 TBCAO75347 108 aaKnown RBP24.33■■□□□ 1.49
TRAPPC4-208ENST00000527680 PLCG1P19174 1290 aa24.33■■□□□ 1.49
TRAPPC4-208ENST00000527680 SCP2P22307 547 aa24.33■■□□□ 1.49
TRAPPC4-208ENST00000527680 LONP1P36776 959 aaKnown RBP24.33■■□□□ 1.49
TRAPPC4-208ENST00000527680 GUCY2FP51841 1108 aa24.33■■□□□ 1.49
TRAPPC4-208ENST00000527680 ZBTB6Q15916 424 aa24.33■■□□□ 1.49
TRAPPC4-208ENST00000527680 PRSS36Q5K4E3 855 aa24.33■■□□□ 1.49
TRAPPC4-208ENST00000527680 BRAPQ7Z569 592 aa24.33■■□□□ 1.49
TRAPPC4-208ENST00000527680 PGLYRP2Q96PD5 576 aa24.33■■□□□ 1.49
TRAPPC4-208ENST00000527680 NELL2Q99435 816 aa24.33■■□□□ 1.49
TRAPPC4-208ENST00000527680 DDX23Q9BUQ8 820 aaKnown RBP24.33■■□□□ 1.49
TRAPPC4-208ENST00000527680 BRD9Q9H8M2 597 aa24.33■■□□□ 1.49
TRAPPC4-208ENST00000527680 VPS13AQ96RL7 3174 aa24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms