RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	ZNF132	P52740	706 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	HDAC4	P56524	1084 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	BPIFB4	P59827	614 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	POU5F1	Q01860	360 aa	Known RBP	4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CUL3	Q13618	768 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	DCTN1	Q14203	1278 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PLCB4	Q15147	1175 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	DDR2	Q16832	855 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CCDC57	Q2TAC2	916 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CCDC158	Q5M9N0	1113 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	FKBP15	Q5T1M5	1219 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	NUGGC	Q68CJ6	796 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	FAAH2	Q6GMR7	532 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MFSD5	Q6N075	450 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RSPH3	Q86UC2	560 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	NOSTRIN	Q8IVI9	506 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PEX5L	Q8IYB4	626 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CEP112	Q8N8E3	955 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ARL10	Q8N8L6	244 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CALML6	Q8TD86	181 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	NUP133	Q8WUM0	1156 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	LMBR1	Q8WVP7	490 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CUL5	Q93034	780 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PPP1R14B	Q96C90	147 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SPDL1	Q96EA4	605 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RUFY1	Q96T51	708 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SH3GL1	Q99961	368 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	NRBP1	Q9UHY1	535 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CORO1C	Q9ULV4	474 aa	Predicted RBP	4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	G3BP2	Q9UN86	482 aa	Known RBP	4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TMED5	Q9Y3A6	229 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ATP6V0A2	Q9Y487	856 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RBM8A	Q9Y5S9	174 aa	Known RBP	4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MRFAP1	Q9Y605	127 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ANKRD30A	Q9BXX3	1397 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	KIF15	Q9NS87	1388 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SPATA31E1	Q6ZUB1	1445 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PLB1	Q6P1J6	1458 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ABCA10	Q8WWZ4	1543 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PLXNC1	O60486	1568 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RERE	Q9P2R6	1566 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ANKRD62	A6NC57	917 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RASSF10	A6NK89	507 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	GOLGA8A	A7E2F4	631 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TMEM232	C9JQI7	657 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	KIF3B	O15066	747 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	GSTA4	O15217	222 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MTRF1	O75570	445 aa	Known RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PENK	P01210	267 aa	Predicted RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	DES	P17661	470 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TRIM21	P19474	475 aa	Known RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CAST	P20810	708 aa	Known RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MCM3	P25205	808 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SMARCA1	P28370	1054 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ATIC	P31939	592 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SLC8A1	P32418	973 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	NEK2	P51955	445 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PHEX	P78562	749 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TAP1	Q03518	808 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	DYNC1I2	Q13409	638 aa	Known RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	BTG3	Q14201	252 aa	Predicted RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	KCNB1	Q14721	858 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MYBPC3	Q14896	1274 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	NAA25	Q14CX7	972 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	GAGE13	Q4V321	117 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TM4SF20	Q53R12	229 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CCDC93	Q567U6	631 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MIS18BP1	Q6P0N0	1132 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	LRRC47	Q8N1G4	583 aa	Known RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	GALNT15	Q8N3T1	639 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TTC30B	Q8N4P2	665 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TRIML1	Q8N9V2	468 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SPC24	Q8NBT2	197 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	BEND2	Q8NDZ0	799 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	HIPK4	Q8NE63	616 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MDGA1	Q8NFP4	955 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TRIM58	Q8NG06	486 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PTPRN2	Q92932	1015 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	GCDH	Q92947	438 aa	Predicted RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PGBD4	Q96DM1	585 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	C16orf45	Q96MC5	204 aa	Predicted RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SENP7	Q9BQF6	1050 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PARD6B	Q9BYG5	372 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	IL23A	Q9NPF7	189 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	KCNH7	Q9NS40	1196 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ORC3	Q9UBD5	711 aa	Predicted RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	HDAC6	Q9UBN7	1215 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SWAP70	Q9UH65	585 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	DDX25	Q9UHL0	483 aa	Known RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	FBXO9	Q9UK97	447 aa	Predicted RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PPIP5K1	Q6PFW1	1433 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	FYCO1	Q9BQS8	1478 aa		4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	EPRS	P07814	1512 aa	Known RBP	4.1	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TRIM64C	A6NLI5	447 aa		4.09	□□□□□ -1.75

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