RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 MUC3AQ02505 3323 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 VWA8A3KMH1 1905 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 GOLGA8IPA6NC78 632 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 GOLGA8JA6NMD2 632 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 I3L4J1 428 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 M0QZQ0 153 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 PIRO00625 290 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 ADAM12O43184 909 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 IL18RAPO95256 599 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 ADH1AP07327 375 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 KLRC2P26717 231 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 UBE2HP62256 183 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 FAM160A1Q05DH4 1040 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 KCNB1Q14721 858 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 TMEM132DQ14C87 1099 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 CLUL1Q15846 466 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 KNOP1Q1ED39 458 aaKnown RBP12.16□□□□□ -0.46
CTSB-214ENST00000527243 KIAA1841Q6NSI8 718 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 ARMCX5Q6P1M9 558 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 RSPO2Q6UXX9 243 aaPredicted RBP12.16□□□□□ -0.46
CTSB-214ENST00000527243 NT5DC4Q86YG4 428 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 NELFCDQ8IXH7 590 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 GPD1LQ8N335 351 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 BEST2Q8NFU1 509 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 CXorf38Q8TB03 319 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 SPATA20Q8TB22 786 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 FEZF2Q8TBJ5 459 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 TIGD1Q96MW7 591 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 NECAB3Q96P71 396 aaPredicted RBP12.16□□□□□ -0.46
CTSB-214ENST00000527243 KCTD10Q9H3F6 313 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 PCIF1Q9H4Z3 704 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 DZANK1Q9NVP4 752 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 DMAC2Q9NW81 257 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 HSPBP1Q9NZL4 362 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 CGNQ9P2M7 1197 aaKnown RBP12.16□□□□□ -0.46
CTSB-214ENST00000527243 MTRRQ9UBK8 725 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 USP15Q9Y4E8 981 aaPredicted RBP12.16□□□□□ -0.46
CTSB-214ENST00000527243 BACE2Q9Y5Z0 518 aa12.16□□□□□ -0.46
CTSB-214ENST00000527243 C19orf67A6NJJ6 358 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 SYN3O14994 580 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 SPTLC1O15269 473 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 XPOTO43592 962 aaKnown RBP12.15□□□□□ -0.46
CTSB-214ENST00000527243 TRAPPC3O43617 180 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 GADD45BO75293 160 aaPredicted RBP12.15□□□□□ -0.46
CTSB-214ENST00000527243 SRGAP2BP0DMP2 458 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 RPL17P18621 184 aaKnown RBP12.15□□□□□ -0.46
CTSB-214ENST00000527243 CA8P35219 290 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 CREMQ03060 361 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 PSMD5Q16401 504 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 ZSCAN23Q3MJ62 389 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 TPRNQ4KMQ1 711 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 C9orf57Q5W0N0 161 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 KANK3Q6NY19 840 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 PDXDC1Q6P996 788 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 CBWD2Q8IUF1 395 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 ELOA2Q8IYF1 753 aaPredicted RBP12.15□□□□□ -0.46
CTSB-214ENST00000527243 HDAC7Q8WUI4 952 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 FAM212AQ96EL1 285 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 UHRF1Q96T88 793 aaPredicted RBP12.15□□□□□ -0.46
CTSB-214ENST00000527243 CD320Q9NPF0 282 aa12.15□□□□□ -0.46
CTSB-214ENST00000527243 RBAKQ9NYW8 714 aaPredicted RBP12.15□□□□□ -0.46
CTSB-214ENST00000527243 TGM5O43548 720 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 GLUD1P00367 558 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 PAX3P23760 479 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 LILRA4P59901 499 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 ZP2Q05996 745 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 RAB33AQ14088 237 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 VARS2Q5ST30 1063 aaKnown RBP12.14□□□□□ -0.47
CTSB-214ENST00000527243 SLC8B1Q6J4K2 584 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 ANKS3Q6ZW76 656 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 HS2ST1Q7LGA3 356 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 CEP57Q86XR8 500 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 SLC9A9Q8IVB4 645 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 C12orf76Q8N812 135 aaPredicted RBP12.14□□□□□ -0.47
CTSB-214ENST00000527243 C1orf127Q8N9H9 656 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 CMASQ8NFW8 434 aaPredicted RBP12.14□□□□□ -0.47
CTSB-214ENST00000527243 GPT2Q8TD30 523 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 BORCS6Q96GS4 357 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 RHOBTB2Q9BYZ6 727 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 ADAM7Q9H2U9 754 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 KIAA1586Q9HCI6 787 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 PDE11AQ9HCR9 933 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 PRKAG3Q9UGI9 489 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 CDH22Q9UJ99 828 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 FBXW11Q9UKB1 542 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 PCDHB8Q9UN66 801 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 FAM50BQ9Y247 325 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 NUB1Q9Y5A7 615 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 ANK1P16157 1881 aa12.14□□□□□ -0.47
CTSB-214ENST00000527243 TCF20Q9UGU0 1960 aaKnown RBP12.14□□□□□ -0.47
CTSB-214ENST00000527243 PTPRJQ12913 1337 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 GOLGA6L4A6NEF3 574 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 ZNF233A6NK53 670 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 DLL1O00548 723 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 PDXKO00764 312 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 CLIC2O15247 247 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 OAZ2O95190 189 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 ITIH3Q06033 890 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 PNOCQ13519 176 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 ZCWPW2Q504Y3 356 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms