RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 KSR1Q8IVT5 923 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 FAM160A2Q8N612 972 aaPredicted RBP12□□□□□ -0.49
NEDD8-204ENST00000526430 C12orf50Q8NA57 414 aaPredicted RBP12□□□□□ -0.49
NEDD8-204ENST00000526430 NLRP7Q8WX94 980 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 BSNDQ8WZ55 320 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 TMEM143Q96AN5 459 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 DNAJC19Q96DA6 116 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 LOXL4Q96JB6 756 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 SCLT1Q96NL6 688 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 FAM193BQ96PV7 902 aaPredicted RBP12□□□□□ -0.49
NEDD8-204ENST00000526430 KXD1Q9BQD3 176 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 GCOM2Q9BZD3 368 aaPredicted RBP12□□□□□ -0.49
NEDD8-204ENST00000526430 HEBP1Q9NRV9 189 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 BMP2KQ9NSY1 1161 aaPredicted RBP12□□□□□ -0.49
NEDD8-204ENST00000526430 LMBRD1Q9NUN5 540 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 KBTBD4Q9NVX7 518 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 KCNH3Q9ULD8 1083 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 PPME1Q9Y570 386 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 CNTNAP2Q9UHC6 1331 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 BPTFQ12830 3046 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 FREM2Q5SZK8 3169 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 MYMKA6NI61 221 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 POLR2DO15514 142 aaKnown RBP11.99□□□□□ -0.49
NEDD8-204ENST00000526430 DGAT1O75907 488 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 POU2F2P09086 479 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 LIG1P18858 919 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 RFC5P40937 340 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 CXCL12P48061 93 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 SF3A2Q15428 464 aaKnown RBP11.99□□□□□ -0.49
NEDD8-204ENST00000526430 RRAGBQ5VZM2 374 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 PSAPL1Q6NUJ1 521 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 AGMOQ6ZNB7 445 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 MRPL10Q7Z7H8 261 aaKnown RBP11.99□□□□□ -0.49
NEDD8-204ENST00000526430 LONP2Q86WA8 852 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 FMR1NBQ8N0W7 255 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-204ENST00000526430 ASAP3Q8TDY4 903 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 ZCCHC14Q8WYQ9 949 aaKnown RBP11.99□□□□□ -0.49
NEDD8-204ENST00000526430 CALML4Q96GE6 196 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 RSAD1Q9HA92 442 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 IFT122Q9HBG6 1241 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 SERTAD1Q9UHV2 236 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 FBXW11Q9UKB1 542 aa11.99□□□□□ -0.49
NEDD8-204ENST00000526430 PIN4Q9Y237 131 aaKnown RBP11.99□□□□□ -0.49
NEDD8-204ENST00000526430 ASCC3Q8N3C0 2202 aaKnown RBP11.98□□□□□ -0.49
NEDD8-204ENST00000526430 SFI1A8K8P3 1242 aa11.98□□□□□ -0.49
NEDD8-204ENST00000526430 USO1O60763 962 aaKnown RBP11.98□□□□□ -0.49
NEDD8-204ENST00000526430 PRPF40AO75400 957 aaKnown RBP11.98□□□□□ -0.49
NEDD8-204ENST00000526430 CSDE1O75534 798 aaKnown RBP11.98□□□□□ -0.49
NEDD8-204ENST00000526430 GLRA2P23416 452 aa11.98□□□□□ -0.49
NEDD8-204ENST00000526430 MAEAQ7L5Y9 396 aa11.98□□□□□ -0.49
NEDD8-204ENST00000526430 NPAS3Q8IXF0 933 aa11.98□□□□□ -0.49
NEDD8-204ENST00000526430 COLGALT2Q8IYK4 626 aa11.98□□□□□ -0.49
NEDD8-204ENST00000526430 FSIP1Q8NA03 581 aa11.98□□□□□ -0.49
NEDD8-204ENST00000526430 PRPF31Q8WWY3 499 aaKnown RBP11.98□□□□□ -0.49
NEDD8-204ENST00000526430 LARP4BQ92615 738 aaKnown RBP11.98□□□□□ -0.49
NEDD8-204ENST00000526430 DHX58Q96C10 678 aa11.98□□□□□ -0.49
NEDD8-204ENST00000526430 ZNF668Q96K58 619 aaPredicted RBP11.98□□□□□ -0.49
NEDD8-204ENST00000526430 FIZ1Q96SL8 496 aa11.98□□□□□ -0.49
NEDD8-204ENST00000526430 INO80BQ9C086 356 aaPredicted RBP11.98□□□□□ -0.49
NEDD8-204ENST00000526430 SUCLA2Q9P2R7 463 aaPredicted RBP11.98□□□□□ -0.49
NEDD8-204ENST00000526430 STK17AQ9UEE5 414 aa11.98□□□□□ -0.49
NEDD8-204ENST00000526430 CCDC39Q9UFE4 941 aa11.98□□□□□ -0.49
NEDD8-204ENST00000526430 KIF26AQ9ULI4 1882 aaPredicted RBP11.97□□□□□ -0.49
NEDD8-204ENST00000526430 ARHGEF35A5YM69 484 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 CHURC1-FNTBB4DL54 471 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 ZNF202O95125 648 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 EPN2O95208 641 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 GUCY2CP25092 1073 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 CASP1P29466 404 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 HOXA6P31267 233 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 FNTBP49356 437 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 AFF1P51825 1210 aaKnown RBP11.97□□□□□ -0.49
NEDD8-204ENST00000526430 NTHL1P78549 312 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 SATB1Q01826 763 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 DSC1Q08554 894 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 LAMTOR4Q0VGL1 99 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 PLA2G2CQ5R387 149 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 CNNM4Q6P4Q7 775 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 CCDC73Q6ZRK6 1079 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 ZNF410Q86VK4 478 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 SPEM1Q8N4L4 309 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 ITFG1Q8TB96 612 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 NTPCRQ9BSD7 190 aaKnown RBP11.97□□□□□ -0.49
NEDD8-204ENST00000526430 MINDY3Q9H8M7 445 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 NDRG2Q9UN36 371 aaKnown RBP11.97□□□□□ -0.49
NEDD8-204ENST00000526430 PRG3Q9Y2Y8 225 aaPredicted RBP11.97□□□□□ -0.49
NEDD8-204ENST00000526430 PCDHB2Q9Y5E7 798 aa11.97□□□□□ -0.49
NEDD8-204ENST00000526430 A0A087WZ62 844 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 FRMD3A2A2Y4 597 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 K7ESF4 209 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 HIP1RO75146 1068 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 XYLBO75191 536 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 EDN1P05305 212 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 SLFN14P0C7P3 912 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 STAT6P42226 847 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 NOVA1P51513 510 aaKnown RBP11.96□□□□□ -0.49
NEDD8-204ENST00000526430 ZNF131P52739 623 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 CACNB1Q02641 598 aaPredicted RBP11.96□□□□□ -0.49
NEDD8-204ENST00000526430 RAD51AP2Q09MP3 1159 aa11.96□□□□□ -0.49
NEDD8-204ENST00000526430 ZNF252P-AS1Q0IIN9 211 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms