RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 ALAS1P13196 640 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 PCSK1P29120 753 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 ERVK-21P61565 698 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 SEPT2Q15019 361 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 CYP2A13Q16696 494 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 ZNF362Q5T0B9 420 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 ZNF384Q8TF68 577 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 CASKIN2Q8WXE0 1202 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 NACC2Q96BF6 587 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 MARS2Q96GW9 593 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 FAXDC2Q96IV6 333 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 UNKLQ9H9P5 680 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 CCM2LQ9NUG4 571 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 TMEM74BQ9NUR3 256 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 MKS1Q9NXB0 559 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 TRHDEQ9UKU6 1024 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 DMTF1Q9Y222 760 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 SCRIBQ14160 1630 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 GOLGA3Q08378 1498 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 TCRBV7S2A1N4TA0A589 114 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 FAM171A2A8MVW0 826 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 KIAA0391O15091 583 aaKnown RBP3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 SLC6A9P48067 706 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 RARRES1P49788 294 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 VAV2P52735 878 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 NOMO3P69849 1222 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 EXOSC10Q01780 885 aaKnown RBP3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 CREMQ03060 361 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 MGAT2Q10469 447 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 GEN1Q17RS7 908 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 BRDTQ58F21 947 aaPredicted RBP3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 NOMO2Q5JPE7 1267 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 SEM1Q6ZVN7 128 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 COLGALT2Q8IYK4 626 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 FITM2Q8N6M3 262 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 TBC1D15Q8TC07 691 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 SSH3Q8TE77 659 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 FUBP1Q96AE4 644 aaKnown RBP3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 SLC2A13Q96QE2 648 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 HEPHQ9BQS7 1158 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 CHMP4AQ9BY43 222 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 GSTO2Q9H4Y5 243 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 ALG13Q9NP73 1137 aaKnown RBP3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 KCTD5Q9NXV2 234 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 SPEF1Q9Y4P9 236 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 MRFAP1Q9Y605 127 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 TNIKQ9UKE5 1360 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 CEP164Q9UPV0 1460 aa3.46□□□□□ -1.86
ECHDC1-218ENST00000525745 TRGV11A0A075B6L2 103 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 SHTN1A0MZ66 631 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 KLHL33A6NCF5 533 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 GABRDO14764 452 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 PEX1O43933 1283 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 MATN4O95460 622 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 MT-CO1P00395 513 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 AMY1AP04745 511 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 DDCP20711 480 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 MTM1Q13496 603 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 ACAP2Q15057 778 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 PTPN21Q16825 1174 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 INAVAQ3KP66 663 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 AKNAD1Q5T1N1 836 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 PNMA8AQ86V59 439 aaPredicted RBP3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 ANKRD13AQ8IZ07 590 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 ZGPATQ8N5A5 531 aaKnown RBP3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 PPM1NQ8N819 430 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 C1orf162Q8NEQ5 155 aaPredicted RBP3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 OR2I1PQ8NGU4 316 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 DPF2Q92785 391 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 CYFIP2Q96F07 1278 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 PNKPQ96T60 521 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 SMAD5Q99717 465 aaKnown RBP3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 C7orf25Q9BPX7 421 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 KLK15Q9H2R5 256 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 MANSC1Q9H8J5 431 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 IL17RBQ9NRM6 502 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 ASB6Q9NWX5 421 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 DDX56Q9NY93 547 aaKnown RBP3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 FAM30AQ9NZY2 134 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 FOXJ2Q9P0K8 574 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 HSFX1Q9UBD0 423 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 FRMD4BQ9Y2L6 1034 aa3.45□□□□□ -1.86
ECHDC1-218ENST00000525745 TNKSO95271 1327 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 MYBBP1AQ9BQG0 1328 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 EIF4G1Q04637 1599 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 PEG3Q9GZU2 1588 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 MYADML2A6NDP7 307 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 LRRC3CA6NJW4 275 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 TRIM75PA6NK02 468 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 XPOTO43592 962 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 ZFPL1O95159 310 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 PDGFRBP09619 1106 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 FCER1AP12319 257 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 IARSP41252 1262 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 MTNR1BP49286 362 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 ATXN1P54253 815 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 CACNA2D1P54289 1103 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 PCBP2Q15366 365 aaKnown RBP eCLIP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms