RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 LILRA4P59901 499 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 DSG1Q02413 1049 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 CREMQ03060 361 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 KLHL10Q6JEL2 608 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 KIAA1841Q6NSI8 718 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 SASS6Q6UVJ0 657 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.37□□□□□ -0.27
CCS-202ENST00000525435 FRMD5Q7Z6J6 570 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 CSGALNACT2Q8N6G5 542 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 LRRC52Q8N7C0 313 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 BORCS6Q96GS4 357 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 SUSD3Q96L08 255 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 DUSP9Q99956 384 aaKnown RBP13.37□□□□□ -0.27
CCS-202ENST00000525435 TTPALQ9BTX7 342 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 VN1R3Q9BXE9 311 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 OXCT2Q9BYC2 517 aaPredicted RBP13.37□□□□□ -0.27
CCS-202ENST00000525435 GOLGA2P5Q9HBQ8 144 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 ENTPD7Q9NQZ7 604 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.37□□□□□ -0.272e-6■■□□□ 14.5
CCS-202ENST00000525435 MRPL17Q9NRX2 175 aaKnown RBP13.37□□□□□ -0.27
CCS-202ENST00000525435 R3HCC1Q9Y3T6 440 aaKnown RBP13.37□□□□□ -0.27
CCS-202ENST00000525435 RALGAPA2Q2PPJ7 1873 aa13.37□□□□□ -0.27
CCS-202ENST00000525435 CITO14578 2027 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 C2orf71A6NGG8 1288 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 M0QZQ0 153 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 STX10O60499 249 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 URODP06132 367 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 FGFR3P22607 806 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 GLUD2P49448 558 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 FAM171A1Q5VUB5 890 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 TRAPPC11Q7Z392 1133 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 C1orf127Q8N9H9 656 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 C3orf58Q8NDZ4 430 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 APPL2Q8NEU8 664 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 CXorf38Q8TB03 319 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 RABGGTAQ92696 567 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 ZNF560Q96MR9 790 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 GZF1Q9H116 711 aaPredicted RBP13.36□□□□□ -0.27
CCS-202ENST00000525435 TLE6Q9H808 572 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 RXFP1Q9HBX9 757 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 ANO10Q9NW15 660 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 TMEM63CQ9P1W3 806 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 FNIP2Q9P278 1114 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 CACNG4Q9UBN1 327 aa13.36□□□□□ -0.27
CCS-202ENST00000525435 TRANK1O15050 2925 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 TRIM49BA6NDI0 452 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 F8W810 466 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 STAU1O95793 577 aaKnown RBP13.35□□□□□ -0.27
CCS-202ENST00000525435 C4BPAP04003 597 aaKnown RBP13.35□□□□□ -0.27
CCS-202ENST00000525435 FAM163BP0C2L3 166 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 PRKCSHP14314 528 aaPredicted RBP13.35□□□□□ -0.27
CCS-202ENST00000525435 TYMPP19971 482 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 ATICP31939 592 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 IRS1P35568 1242 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 TAF6P49848 677 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 BFSP1Q12934 665 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 MYO1EQ12965 1108 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 COL19A1Q14993 1142 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 PTPN14Q15678 1187 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 DPCR1Q3MIW9 517 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 SV2CQ496J9 727 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 CAVIN1Q6NZI2 390 aaKnown RBP13.35□□□□□ -0.27
CCS-202ENST00000525435 ANKS3Q6ZW76 656 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 TAS1R1Q7RTX1 841 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 PPFIBP1Q86W92 1011 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 OR5B17Q8NGF7 314 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 PIK3R5Q8WYR1 880 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 ZNF516Q92618 1163 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 POP1Q99575 1024 aaKnown RBP13.35□□□□□ -0.27
CCS-202ENST00000525435 EMILIN2Q9BXX0 1053 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 MTMR12Q9C0I1 747 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 ARMCX3Q9UH62 379 aaPredicted RBP13.35□□□□□ -0.27
CCS-202ENST00000525435 SIX4Q9UIU6 781 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 DSEQ9UL01 958 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 PCDHB8Q9UN66 801 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 AGAP1Q9UPQ3 857 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 CTNND2Q9UQB3 1225 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 BACE2Q9Y5Z0 518 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 CDH23Q9H251 3354 aa13.35□□□□□ -0.27
CCS-202ENST00000525435 PRRC2BQ5JSZ5 2229 aaKnown RBP13.35□□□□□ -0.27
CCS-202ENST00000525435 MYO7AQ13402 2215 aa13.34□□□□□ -0.27
CCS-202ENST00000525435 LRRIQ3A6PVS8 624 aaPredicted RBP13.34□□□□□ -0.27
CCS-202ENST00000525435 KPNA7A9QM74 516 aa13.34□□□□□ -0.27
CCS-202ENST00000525435 H7C4K7 107 aa13.34□□□□□ -0.27
CCS-202ENST00000525435 OAZ2O95190 189 aa13.34□□□□□ -0.27
CCS-202ENST00000525435 ITGB3P05106 788 aa13.34□□□□□ -0.27
CCS-202ENST00000525435 POLR2BP30876 1174 aaKnown RBP13.34□□□□□ -0.27
CCS-202ENST00000525435 GUCY2FP51841 1108 aa13.34□□□□□ -0.27
CCS-202ENST00000525435 MARSP56192 900 aaKnown RBP13.34□□□□□ -0.27
CCS-202ENST00000525435 MRPL58Q14197 206 aaKnown RBP13.34□□□□□ -0.27
CCS-202ENST00000525435 STX1AQ16623 288 aa13.34□□□□□ -0.27
CCS-202ENST00000525435 DUSP6Q16828 381 aa13.34□□□□□ -0.27
CCS-202ENST00000525435 ZACNQ401N2 412 aa13.34□□□□□ -0.27
CCS-202ENST00000525435 TCEAL5Q5H9L2 206 aa13.34□□□□□ -0.27
CCS-202ENST00000525435 C15orf39Q6ZRI6 1047 aa13.34□□□□□ -0.27
CCS-202ENST00000525435 DPH6Q7L8W6 267 aa13.34□□□□□ -0.27
CCS-202ENST00000525435 SPATA18Q8TC71 538 aa13.34□□□□□ -0.27
CCS-202ENST00000525435 PLEKHO2Q8TD55 490 aa13.34□□□□□ -0.27
CCS-202ENST00000525435 HASPINQ8TF76 798 aa13.34□□□□□ -0.27
CCS-202ENST00000525435 TAF4BQ92750 862 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms