RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 MED21Q13503 144 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 MAPK6Q16659 721 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 LPCAT4Q643R3 524 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 DPY19L2P1Q6NXN4 242 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 KLC3Q6P597 504 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 LRRC8BQ6P9F7 803 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 CCDC174Q6PII3 467 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 LVRNQ6Q4G3 990 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 NCCRP1Q6ZVX7 275 aaPredicted RBP11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 SYT2Q8N9I0 419 aaPredicted RBP11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 ZNF75CPQ92670 426 aaPredicted RBP11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 LZTS2Q9BRK4 669 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 DDX43Q9NXZ2 648 aaKnown RBP11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 BARHL2Q9NY43 387 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 ANAPC5Q9UJX4 755 aa11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 RPL26L1Q9UNX3 145 aaKnown RBP11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 COL1A1P02452 1464 aaPredicted RBP11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 TNS1Q9HBL0 1735 aaKnown RBP11.92□□□□□ -0.5
CLNS1A-204ENST00000525428 GOLGA8RI6L899 631 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 SPOPO43791 374 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 ZWINTO95229 277 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 GAS8O95995 478 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 CYP11B2P19099 503 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 PDK4Q16654 411 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 CCDC62Q6P9F0 684 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 CYFIP1Q7L576 1253 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 HIPK4Q8NE63 616 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 ZSWIM1Q9BR11 485 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 CCDC77Q9BR77 488 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 THTPAQ9BU02 230 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 SPZ1Q9BXG8 430 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 DNAJC18Q9H819 358 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 SAR1AQ9NR31 198 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 GGA1Q9UJY5 639 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 A0A1W2PPM1 405 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 USP17L3A6NCW0 530 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 USP17L4A6NCW7 530 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 B2RBV5 119 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 H0YIN7 160 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 C2CD2LO14523 706 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 AKAP3O75969 853 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 TROVE2P10155 538 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 VARSP26640 1264 aaKnown RBP11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 GJA8P48165 433 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 TFAP4Q01664 338 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 KDSRQ06136 332 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 DRAP1Q14919 205 aaPredicted RBP11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 SEPT7Q16181 437 aaKnown RBP11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 SGO2Q562F6 1265 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 RIPOR1Q6ZS17 1223 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 USP17L1Q7RTZ2 530 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 JDP2Q8WYK2 163 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 PPP2R3CQ969Q6 453 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 SLC35B4Q969S0 331 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 KLF6Q99612 283 aaPredicted RBP11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 IKZF4Q9H2S9 585 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 BTBD7Q9P203 1132 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 KANSL3Q9P2N6 904 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 TRAF3IP3Q9Y228 551 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 BBOX1O75936 387 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 CDK4P11802 303 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 ALOX15P16050 662 aaPredicted RBP11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 HOXA10P31260 410 aaPredicted RBP11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 CD151P48509 253 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 DLG1Q12959 904 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 ACAP1Q15027 740 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 C1orf146Q5VVC0 180 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 DGKHQ86XP1 1220 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 SLC13A5Q86YT5 568 aaPredicted RBP11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 PYDC1Q8WXC3 89 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 PTCD3Q96EY7 689 aaKnown RBP11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 KCTD10Q9H3F6 313 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 PCDH18Q9HCL0 1135 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 SH3GLB2Q9NR46 395 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 CHST7Q9NS84 486 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 NENFQ9UMX5 172 aa11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 HEMK1Q9Y5R4 338 aaPredicted RBP11.91□□□□□ -0.5
CLNS1A-204ENST00000525428 ENO1P06733 434 aaKnown RBP11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 LMNB1P20700 586 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 ADRA1DP25100 572 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 MLH1P40692 756 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 HIRAP54198 1017 aaPredicted RBP11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 CYLC2Q14093 348 aaPredicted RBP11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 ZNF568Q3ZCX4 644 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 LRRC6Q86X45 466 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 SHKBP1Q8TBC3 707 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 CORO1BQ9BR76 489 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 SIX2Q9NPC8 291 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 INIPQ9NRY2 104 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 KIAA1024Q9UPX6 916 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 LAMB2P55268 1798 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 KLRG2A4D1S0 409 aaPredicted RBP11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 MAGEB2O15479 319 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 FTLP02792 175 aaPredicted RBP11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 NPR1P16066 1061 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 CCR3P51677 355 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 RASA3Q14644 834 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 EPHA7Q15375 998 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 SFT2D3Q587I9 215 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms