RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 TXLNGYQ9BZA5 131 aa6.1□□□□□ -1.43
USP47-204ENST00000525078 SIL1Q9H173 461 aa6.1□□□□□ -1.43
USP47-204ENST00000525078 PDCL3Q9H2J4 239 aa6.1□□□□□ -1.43
USP47-204ENST00000525078 TMEM8AQ9HCN3 771 aa6.1□□□□□ -1.43
USP47-204ENST00000525078 EIF2B3Q9NR50 452 aaKnown RBP6.1□□□□□ -1.43
USP47-204ENST00000525078 DIAPH3Q9NSV4 1193 aa6.1□□□□□ -1.43
USP47-204ENST00000525078 CALCOCO1Q9P1Z2 691 aa6.1□□□□□ -1.43
USP47-204ENST00000525078 RRP7AQ9Y3A4 280 aaKnown RBP6.1□□□□□ -1.43
USP47-204ENST00000525078 PCDHB4Q9Y5E5 795 aa6.1□□□□□ -1.43
USP47-204ENST00000525078 F8W735 103 aaPredicted RBP6.09□□□□□ -1.43
USP47-204ENST00000525078 ACOT7O00154 380 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 IGF2BP3O00425 579 aaKnown RBP eCLIP6.09□□□□□ -1.43
USP47-204ENST00000525078 SPTLC2O15270 562 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 USP1O94782 785 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 ALX3O95076 343 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 HSPA4LO95757 839 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 AHSGP02765 367 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 FTH1P19P0C7X4 201 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 MTHFD1P11586 935 aaKnown RBP6.09□□□□□ -1.43
USP47-204ENST00000525078 RAC2P15153 192 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 MUTP22033 750 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 ADSLP30566 484 aaPredicted RBP6.09□□□□□ -1.43
USP47-204ENST00000525078 HOXD13P35453 343 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 FLT3LGP49771 235 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 ARFIP2P53365 341 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 PER3P56645 1201 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 AP2B1P63010 937 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 TEKQ02763 1124 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 MGAT5Q09328 741 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 WTAPQ15007 396 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 NUGGCQ68CJ6 796 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 PAOXQ6QHF9 649 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 FAM214BQ7L5A3 538 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 IQCA1Q86XH1 822 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 MPP5Q8N3R9 675 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 NGEFQ8N5V2 710 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 MSANTD4Q8NCY6 345 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 CSGALNACT1Q8TDX6 532 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 SSH3Q8TE77 659 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 UBE2FQ969M7 185 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 DBNDD2Q9BQY9 259 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 KRTAP4-8Q9BYQ9 185 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 OSBPL6Q9BZF3 934 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 ZNF518BQ9C0D4 1074 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 ARHGAP39Q9C0H5 1083 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 PDGFDQ9GZP0 370 aaPredicted RBP6.09□□□□□ -1.43
USP47-204ENST00000525078 ADAM7Q9H2U9 754 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 DBNDD1Q9H9R9 158 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 GRPEL1Q9HAV7 217 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 INCENPQ9NQS7 918 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.09□□□□□ -1.43
USP47-204ENST00000525078 RPS6KA6Q9UK32 745 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 CNPY2Q9Y2B0 182 aa6.09□□□□□ -1.43
USP47-204ENST00000525078 TDRD9Q8NDG6 1382 aaKnown RBP6.08□□□□□ -1.44
USP47-204ENST00000525078 CNTNAP5Q8WYK1 1306 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 H3BS24 57 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 MSTNO14793 375 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 TMEM63AO94886 807 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 HDCP19113 662 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 MAP4P27816 1152 aaKnown RBP6.08□□□□□ -1.44
USP47-204ENST00000525078 ECHS1P30084 290 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 ATP6V1E1P36543 226 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 PIK3CAP42336 1068 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 SEC24CP53992 1094 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 TLE1Q04724 770 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 RAB32Q13637 225 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 BECN1Q14457 450 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 UBE3CQ15386 1083 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 UBXN11Q5T124 520 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 GJC2Q5T442 439 aaPredicted RBP6.08□□□□□ -1.44
USP47-204ENST00000525078 FAM47EQ6ZV65 393 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 USP49Q70CQ1 688 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 KRT74Q7RTS7 529 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 GALNTL5Q7Z4T8 443 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 R3HCC1LQ7Z5L2 792 aaKnown RBP6.08□□□□□ -1.44
USP47-204ENST00000525078 CPLX4Q7Z7G2 160 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 TRMT2AQ8IZ69 625 aaKnown RBP6.08□□□□□ -1.44
USP47-204ENST00000525078 TMEM57Q8N5G2 664 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 PCSK9Q8NBP7 692 aaKnown RBP6.08□□□□□ -1.44
USP47-204ENST00000525078 MAML1Q92585 1016 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 ACDQ96AP0 544 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 CCDC34Q96HJ3 373 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 TRAPPC9Q96Q05 1148 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 GDF15Q99988 308 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 SEZ6LQ9BYH1 1024 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 MRPL46Q9H2W6 279 aaKnown RBP6.08□□□□□ -1.44
USP47-204ENST00000525078 ACAD9Q9H845 621 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 ATP8A2Q9NTI2 1148 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 TBX20Q9UMR3 447 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 MTO1Q9Y2Z2 717 aaKnown RBP6.08□□□□□ -1.44
USP47-204ENST00000525078 HS3ST4Q9Y661 456 aa6.08□□□□□ -1.44
USP47-204ENST00000525078 RPTORQ8N122 1335 aa6.07□□□□□ -1.44
USP47-204ENST00000525078 A0A1W2PQJ5 194 aa6.07□□□□□ -1.44
USP47-204ENST00000525078 hCG_1807616A0A1W2PRN6 198 aa6.07□□□□□ -1.44
USP47-204ENST00000525078 PYCARD-AS1I3L0S3 204 aa6.07□□□□□ -1.44
USP47-204ENST00000525078 NFIBO00712 420 aa6.07□□□□□ -1.44
USP47-204ENST00000525078 PTP4A3O75365 173 aa6.07□□□□□ -1.44
USP47-204ENST00000525078 MAFO75444 373 aaPredicted RBP6.07□□□□□ -1.44
USP47-204ENST00000525078 RASSF9O75901 435 aa6.07□□□□□ -1.44
USP47-204ENST00000525078 SGPL1O95470 568 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms