RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SEPT2Q15019 361 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.45□□□□□ -2.02
CD44-212ENST00000524922 MUM1Q2TAK8 710 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 ATP13A4Q4VNC1 1196 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 ATXN7L2Q5T6C5 722 aaPredicted RBP2.45□□□□□ -2.02
CD44-212ENST00000524922 STRIP1Q5VSL9 837 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 AFMIDQ63HM1 303 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 KIAA0895LQ68EN5 471 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 OTUD7BQ6GQQ9 843 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 ARMC6Q6NXE6 501 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 SUPT20HQ8NEM7 779 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 GPR156Q8NFN8 814 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 FBXO18Q8NFZ0 1043 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 ZFP28Q8NHY6 868 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 RIN2Q8WYP3 895 aaPredicted RBP2.45□□□□□ -2.02
CD44-212ENST00000524922 BOD1Q96IK1 185 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 DRC1Q96MC2 740 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 ZSWIM1Q9BR11 485 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 DMRT3Q9NQL9 472 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 SEMA4GQ9NTN9 838 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 FBXO34Q9NWN3 711 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 POGKQ9P215 609 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 MAPRE3Q9UPY8 281 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 INSL6Q9Y581 213 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 AHDC1Q5TGY3 1603 aaPredicted RBP2.45□□□□□ -2.02
CD44-212ENST00000524922 SAMD9LQ8IVG5 1584 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 INO80Q9ULG1 1556 aaPredicted RBP2.44□□□□□ -2.02
CD44-212ENST00000524922 MIA2Q96PC5 1412 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 PRDM15P57071 1507 aaPredicted RBP2.44□□□□□ -2.02
CD44-212ENST00000524922 PREX2Q70Z35 1606 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 A0A1B0GTW7 788 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.44□□□□□ -2.02
CD44-212ENST00000524922 LRRC3CA6NJW4 275 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 EYA4O95677 639 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 IGLV2-14P01704 120 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 SNRPA1P09661 255 aaKnown RBP2.44□□□□□ -2.02
CD44-212ENST00000524922 ITGAMP11215 1152 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 FGFR4P22455 802 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 FDXRP22570 491 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 SLC6A2P23975 617 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 CD38P28907 300 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 CXCR5P32302 372 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 MCAMP43121 646 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 ALDH1A3P47895 512 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 RARRES1P49788 294 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 SESN3P58005 492 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 CXADRP78310 365 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 MRPS9P82933 396 aaKnown RBP2.44□□□□□ -2.02
CD44-212ENST00000524922 MPP3Q13368 585 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 CYP2A13Q16696 494 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 UGT8Q16880 541 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 Q6ZNX1 250 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 PDZD4Q76G19 769 aaPredicted RBP2.44□□□□□ -2.02
CD44-212ENST00000524922 SLC44A3Q8N4M1 653 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 BOLLQ8N9W6 283 aaKnown RBP2.44□□□□□ -2.02
CD44-212ENST00000524922 OR2I1PQ8NGU4 316 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 LEO1Q8WVC0 666 aaPredicted RBP2.44□□□□□ -2.02
CD44-212ENST00000524922 FUBP3Q96I24 572 aaKnown RBP eCLIP2.44□□□□□ -2.02
CD44-212ENST00000524922 Q96MF0 132 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 ACAP3Q96P50 834 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 MYOCQ99972 504 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 MRI1Q9BV20 369 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 HSFX1Q9UBD0 423 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 NOC2LQ9Y3T9 749 aaKnown RBP2.44□□□□□ -2.02
CD44-212ENST00000524922 TBX22Q9Y458 520 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 MYO5CQ9NQX4 1742 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 TNRQ92752 1358 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 PIK3R4Q99570 1358 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 A2MP01023 1474 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 UGGT1Q9NYU2 1555 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 IQGAP1P46940 1657 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 ZC3H13Q5T200 1668 aaKnown RBP2.44□□□□□ -2.02
CD44-212ENST00000524922 KIDINS220Q9ULH0 1771 aa2.44□□□□□ -2.02
CD44-212ENST00000524922 PRAG1Q86YV5 1406 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 SETD5Q9C0A6 1442 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 EP400Q96L91 3159 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 MROH1Q8NDA8 1641 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 ZEB2O60315 1214 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 PHF2O75151 1096 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 FOSP01100 380 aaPredicted RBP2.43□□□□□ -2.02
CD44-212ENST00000524922 AMY1AP04745 511 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 HLA-DOAP06340 250 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 SPATA31D3P0C874 917 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 MYCLP1P12525 358 aaPredicted RBP2.43□□□□□ -2.02
CD44-212ENST00000524922 ADSLP30566 484 aaPredicted RBP2.43□□□□□ -2.02
CD44-212ENST00000524922 GPR3P46089 330 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 MTNR1BP49286 362 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 KRTAP10-9P60411 292 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 CDK17Q00537 523 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 SLFN5Q08AF3 891 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 UBXN2BQ14CS0 331 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 ANO4Q32M45 955 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 TSHZ3Q63HK5 1081 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 SPATA31D4Q6ZUB0 917 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 LHFPL2Q6ZUX7 228 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 SEM1Q6ZVN7 128 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 MED25Q71SY5 747 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 C1QL2Q7Z5L3 287 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 C11orf74Q86VG3 221 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 DRC7Q8IY82 874 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms