RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 TRABDQ9H4I3 376 aa19.33■□□□□ 0.68
PCDHB18P-201ENST00000524813 EDF1O60869 148 aaKnown RBP19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 CALCAP01258 141 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 ADRB2P07550 413 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 BMP3P12645 472 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 SARNPP82979 210 aaKnown RBP19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 CLEC16AQ2KHT3 1053 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 DAB2IPQ5VWQ8 1189 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 C12orf56Q8IXR9 622 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 CCDC89Q8N998 374 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 HELQQ8TDG4 1101 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 ASAP3Q8TDY4 903 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 DHX38Q92620 1227 aaKnown RBP19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 TEKT1Q969V4 418 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 DDX27Q96GQ7 796 aaKnown RBP19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 SH3GL3Q99963 347 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 LARSQ9P2J5 1176 aaKnown RBP19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 PCDHAC2Q9Y5I4 1007 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 PRPF4O43172 522 aaKnown RBP eCLIP19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 ABHD2P08910 425 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 ARP10275 920 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 PTDSS1P48651 473 aaKnown RBP19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 NR1H3Q13133 447 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 PDK4Q16654 411 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 WASHC2DQ5SRD0 308 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 RGS9BPQ6ZS82 235 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 SUPT20HQ8NEM7 779 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 PARD3BQ8TEW8 1205 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 C10orf82Q8WW14 230 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 ZBTB10Q96DT7 871 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 KIAA1586Q9HCI6 787 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 UBN1Q9NPG3 1134 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 MROH7Q68CQ1 1323 aa19.32■□□□□ 0.68
PCDHB18P-201ENST00000524813 POC1B-GALNT4F8VUJ3 575 aa19.31■□□□□ 0.68
PCDHB18P-201ENST00000524813 ENTPD5O75356 428 aa19.31■□□□□ 0.68
PCDHB18P-201ENST00000524813 KLF1Q13351 362 aaPredicted RBP19.31■□□□□ 0.68
PCDHB18P-201ENST00000524813 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.31■□□□□ 0.68
PCDHB18P-201ENST00000524813 C4orf33Q8N1A6 199 aa19.31■□□□□ 0.68
PCDHB18P-201ENST00000524813 LRRC8CQ8TDW0 803 aa19.31■□□□□ 0.68
PCDHB18P-201ENST00000524813 KIFAP3Q92845 792 aa19.31■□□□□ 0.68
PCDHB18P-201ENST00000524813 CFAP57Q96MR6 1250 aa19.31■□□□□ 0.68
PCDHB18P-201ENST00000524813 WDR11Q9BZH6 1224 aa19.31■□□□□ 0.68
PCDHB18P-201ENST00000524813 DENND2DQ9H6A0 471 aaPredicted RBP19.31■□□□□ 0.68
PCDHB18P-201ENST00000524813 SAYSD1Q9NPB0 183 aa19.31■□□□□ 0.68
PCDHB18P-201ENST00000524813 PRR12Q9ULL5 1215 aa19.31■□□□□ 0.68
PCDHB18P-201ENST00000524813 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.31■□□□□ 0.68
PCDHB18P-201ENST00000524813 ATRNL1Q5VV63 1379 aa19.31■□□□□ 0.68
PCDHB18P-201ENST00000524813 DDX39AO00148 427 aaKnown RBP19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 PMM2O15305 246 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 RPA3P35244 121 aaPredicted RBP19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 RASSF2P50749 326 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 PKN2Q16513 984 aaKnown RBP19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 P3H1Q32P28 736 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 CEP55Q53EZ4 464 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 THEMIS2Q5TEJ8 643 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 HHIPL2Q6UWX4 724 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 TMEM179Q6ZVK1 233 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 ZCCHC9Q8N567 271 aaKnown RBP19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 TMEM174Q8WUU8 243 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 CCDC127Q96BQ5 260 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 RBBP6Q7Z6E9 1792 aaKnown RBP19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 KRT15P19012 456 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 TUBP50607 506 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 MRPS35P82673 323 aaKnown RBP19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 ALCAMQ13740 583 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 CCNG2Q16589 344 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 TAF1BQ53T94 588 aaPredicted RBP19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 CMPK2Q5EBM0 449 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 CC2D2BQ6DHV5 1058 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 LLGL2Q6P1M3 1020 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 GSTA5Q7RTV2 222 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 SMC6Q96SB8 1091 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 TEKT3Q9BXF9 490 aa19.3■□□□□ 0.68
PCDHB18P-201ENST00000524813 SLC1A1P43005 524 aa19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 TBC1D10BQ4KMP7 808 aaPredicted RBP19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 CBWD2Q8IUF1 395 aa19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 MCOLN2Q8IZK6 566 aa19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 PI4KBQ9UBF8 816 aa19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 SMG5Q9UPR3 1016 aaKnown RBP19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 SMCHD1A6NHR9 2005 aa19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 LRRD1A4D1F6 860 aa19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 KRT5P13647 590 aa19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 KLRC2P26717 231 aa19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 ADSSP30520 456 aa19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 SLC1A5Q15758 541 aa19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 ABCB5Q2M3G0 1257 aa19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 HP1BP3Q5SSJ5 553 aaPredicted RBP19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 KRT39Q6A163 491 aa19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 DNAJC9Q8WXX5 260 aa19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 NT5C1BQ96P26 610 aa19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 ZNF277Q9NRM2 450 aaPredicted RBP19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 ZNFX1Q9P2E3 1918 aaKnown RBP19.29■□□□□ 0.68
PCDHB18P-201ENST00000524813 SPDYE5A6NIY4 337 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 TRAFD1O14545 582 aaPredicted RBP19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 POLR2MP0CAP2 368 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 FDX1P10109 184 aa19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 MAPTP10636 758 aaKnown RBP19.28■□□□□ 0.68
PCDHB18P-201ENST00000524813 ACADSP16219 412 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms