RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 ABCB5Q2M3G0 1257 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 RNF43Q68DV7 783 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 XXYLT1Q8NBI6 393 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 RFWD2Q8NHY2 731 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 DCAF4Q8WV16 495 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 TEKT1Q969V4 418 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 TRAIPQ9BWF2 469 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 WDR11Q9BZH6 1224 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 PPP1R12CQ9BZL4 782 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 GLT8D2Q9H1C3 349 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 GTF3C4Q9UKN8 822 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 ATP8B3O60423 1300 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 A0A0G2JND7 137 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 IPO5O00410 1097 aaKnown RBP13.98□□□□□ -0.17
CAPN1-202ENST00000524773 GAS8O95995 478 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 FDX1P10109 184 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 PIK3CAP42336 1068 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 CPA2P48052 419 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 HAUS6Q7Z4H7 955 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 IL31RAQ8NI17 732 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 HELQQ8TDG4 1101 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 MAML1Q92585 1016 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 RBM17Q96I25 401 aaKnown RBP13.98□□□□□ -0.17
CAPN1-202ENST00000524773 MIPEPQ99797 713 aa13.98□□□□□ -0.17
CAPN1-202ENST00000524773 CFAP69A5D8W1 941 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 ATP5DP30049 168 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 GBP1P32455 592 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 NRLP54845 237 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 CDR2Q01850 454 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 PTK6Q13882 451 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 SNRNP35Q16560 246 aaKnown RBP13.97□□□□□ -0.17
CAPN1-202ENST00000524773 MAPK6Q16659 721 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 CRY2Q49AN0 593 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 TMEM154Q6P9G4 183 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 CROCCP2Q86T23 111 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 ZBED8Q8IZ13 594 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 STK32AQ8WU08 396 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 DDX1Q92499 740 aaKnown RBP13.97□□□□□ -0.17
CAPN1-202ENST00000524773 MAK16Q9BXY0 300 aaKnown RBP13.97□□□□□ -0.17
CAPN1-202ENST00000524773 TUFT1Q9NNX1 390 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 CYP39A1Q9NYL5 469 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 DLGAP2Q9P1A6 1054 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 DNPEPQ9ULA0 475 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 SMIM24O75264 130 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 ADRA1DP25100 572 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 MXRA7P84157 204 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 SPP2Q13103 211 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 SLC15A2Q16348 729 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 CEP55Q53EZ4 464 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 MDH1BQ5I0G3 518 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 FAM102BQ5T8I3 360 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 OTOAQ7RTW8 1153 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 C12orf50Q8NA57 414 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-202ENST00000524773 DDX27Q96GQ7 796 aaKnown RBP13.97□□□□□ -0.17
CAPN1-202ENST00000524773 TDRD3Q9H7E2 651 aaKnown RBP13.97□□□□□ -0.17
CAPN1-202ENST00000524773 FBXO6Q9NRD1 293 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-202ENST00000524773 HOMER2Q9NSB8 354 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 TXLNGQ9NUQ3 528 aa13.97□□□□□ -0.17
CAPN1-202ENST00000524773 SPATS2LQ9NUQ6 558 aaKnown RBP13.97□□□□□ -0.17
CAPN1-202ENST00000524773 CORO1CQ9ULV4 474 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-202ENST00000524773 ADGRA3Q8IWK6 1321 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 POLRMTO00411 1230 aaKnown RBP13.96□□□□□ -0.17
CAPN1-202ENST00000524773 ZBED4O75132 1171 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 KRT36O76013 467 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 FOSP01100 380 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-202ENST00000524773 PECAM1P16284 738 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-202ENST00000524773 UGCGQ16739 394 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 ACAD10Q6JQN1 1059 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 LVRNQ6Q4G3 990 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 STXBP4Q6ZWJ1 553 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 TRABD2AQ86V40 505 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 ATL2Q8NHH9 583 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 LRRC8CQ8TDW0 803 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 SHC3Q92529 594 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 DDX50Q9BQ39 737 aaKnown RBP13.96□□□□□ -0.17
CAPN1-202ENST00000524773 A6NHS1 94 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 GNAT1P11488 350 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 ITGB5P18084 799 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 KRT4P19013 534 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 SARNPP82979 210 aaKnown RBP13.96□□□□□ -0.17
CAPN1-202ENST00000524773 MOGSQ13724 837 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 TXNRD3NBQ6F5E7 133 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 ZNF622Q969S3 477 aaKnown RBP eCLIP13.96□□□□□ -0.177e-7■■■□□ 15.2
CAPN1-202ENST00000524773 RAB3IPQ96QF0 476 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-202ENST00000524773 LRMDAQ9H2I8 198 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 ZNF148Q9UQR1 794 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 NEU2Q9Y3R4 380 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 ZHX2Q9Y6X8 837 aa13.96□□□□□ -0.17
CAPN1-202ENST00000524773 GZMAP12544 262 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 SSTR1P30872 391 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 MFAP3P55082 362 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 DYNLT1P63172 113 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 GPS1Q13098 491 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 PPP2R5CQ13362 524 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 MUM1Q2TAK8 710 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 TTC7BQ86TV6 843 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 ANKRD35Q8N283 1001 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 NYAP2Q9P242 653 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 KCNG1Q9UIX4 513 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 ZFP69BQ9UJL9 534 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms