RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 PDXDC1Q6P996 788 aa10.54□□□□□ -0.72
CNKSR1-209ENST00000524529 MPZL3Q6UWV2 235 aa10.54□□□□□ -0.72
CNKSR1-209ENST00000524529 NPAS3Q8IXF0 933 aa10.54□□□□□ -0.72
CNKSR1-209ENST00000524529 KCNG4Q8TDN1 519 aa10.54□□□□□ -0.72
CNKSR1-209ENST00000524529 SPIRE2Q8WWL2 714 aa10.54□□□□□ -0.72
CNKSR1-209ENST00000524529 ING5Q8WYH8 240 aa10.54□□□□□ -0.72
CNKSR1-209ENST00000524529 DRC1Q96MC2 740 aa10.54□□□□□ -0.72
CNKSR1-209ENST00000524529 ACAP3Q96P50 834 aa10.54□□□□□ -0.72
CNKSR1-209ENST00000524529 PLA2G2FQ9BZM2 168 aa10.54□□□□□ -0.72
CNKSR1-209ENST00000524529 FOXQ1Q9C009 403 aa10.54□□□□□ -0.72
CNKSR1-209ENST00000524529 C17orf75Q9HAS0 396 aa10.54□□□□□ -0.72
CNKSR1-209ENST00000524529 ARHGEF3Q9NR81 526 aa10.54□□□□□ -0.72
CNKSR1-209ENST00000524529 TUBGCP4Q9UGJ1 667 aa10.54□□□□□ -0.72
CNKSR1-209ENST00000524529 TSC2P49815 1807 aa10.54□□□□□ -0.72
CNKSR1-209ENST00000524529 TICRRQ7Z2Z1 1910 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 SHISA7A6NL88 538 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 PLA2G4BP0C869 781 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 KCNA4P22459 653 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 MARCKSP29966 332 aaPredicted RBP10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 TNFSF9P41273 254 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 CCR2P41597 374 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 YARSP54577 528 aaKnown RBP10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 STARD6P59095 220 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 DNM1Q05193 864 aaKnown RBP10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 SPAG1Q07617 926 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 MCL1Q07820 350 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 FOXD4L6Q3SYB3 417 aaPredicted RBP10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 ZBTB41Q5SVQ8 909 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 FOXD4L3Q6VB84 417 aaPredicted RBP10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 ANKS3Q6ZW76 656 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 KRI1Q8N9T8 703 aaKnown RBP10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 ZNF461Q8TAF7 563 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 TCEAL4Q96EI5 215 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 CHAMP1Q96JM3 812 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 TOPORSQ9NS56 1045 aaPredicted RBP10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 BLOC1S4Q9NUP1 217 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 ANKFY1Q9P2R3 1169 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 FBXO2Q9UK22 296 aaPredicted RBP10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 FBXL5Q9UKA1 691 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 ZFP37Q9Y6Q3 630 aaPredicted RBP10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 DMXL1Q9Y485 3027 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 CEP250Q9BV73 2442 aa10.53□□□□□ -0.72
CNKSR1-209ENST00000524529 ARHGEF37A1IGU5 675 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 STK25O00506 426 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 SYN3O14994 580 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 FAM189A1O60320 539 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 XYLBO75191 536 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 TOM1L1O75674 476 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 VNN2O95498 520 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 RHOP08100 348 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 CXCL8P10145 99 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 CEBPBP17676 345 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 GUCY2FP51841 1108 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 NCKAP1LP55160 1127 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 SNW1Q13573 536 aaKnown RBP10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 NOLC1Q14978 699 aaKnown RBP eCLIP10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 ZBTB6Q15916 424 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 PABPC1LQ4VXU2 614 aaKnown RBP10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 PRSS36Q5K4E3 855 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 SPECC1Q5M775 1068 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 ZPBP2Q6X784 338 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 APBB1IPQ7Z5R6 666 aaPredicted RBP10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 MAML2Q8IZL2 1156 aaPredicted RBP10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 PJA1Q8NG27 643 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 KCNN1Q92952 543 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 MCRS1Q96EZ8 462 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 SUSD3Q96L08 255 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 SPATA32Q96LK8 384 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 FIZ1Q96SL8 496 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 KXD1Q9BQD3 176 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 TCHPQ9BT92 498 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 DDX23Q9BUQ8 820 aaKnown RBP10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 TIPINQ9BVW5 301 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 SLC38A7Q9NVC3 462 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 KCNH3Q9ULD8 1083 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 MTF2Q9Y483 593 aaPredicted RBP10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 DENND4CQ5VZ89 1909 aa10.52□□□□□ -0.73
CNKSR1-209ENST00000524529 TTC26A0AVF1 554 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 PPEF2O14830 753 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 TRAPPC3O43617 180 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 CUTAO60888 179 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 MOSPD3O75425 235 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 ATF2P15336 505 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 FCARP24071 287 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 RPL9P32969 192 aaKnown RBP10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 UBA7P41226 1012 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 ME1P48163 572 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 ARPP19P56211 112 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 TANGO2Q6ICL3 276 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 SLC39A4Q6P5W5 647 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 USP49Q70CQ1 688 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 RTL10Q7L3V2 364 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 HS6ST3Q8IZP7 471 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 DDX12PQ92771 950 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 NKD2Q969F2 451 aaPredicted RBP10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 CLIC6Q96NY7 704 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 REEP2Q9BRK0 252 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 CRISPLD1Q9H336 500 aa10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 AVENQ9NQS1 362 aaPredicted RBP10.51□□□□□ -0.73
CNKSR1-209ENST00000524529 MRPS23Q9Y3D9 190 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms