RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 TMEM270Q6UE05 265 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 FAM43BQ6ZT52 329 aaPredicted RBP10.67□□□□□ -0.7
VPS13B-212ENST00000524330 DAAM2Q86T65 1068 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 NOP9Q86U38 636 aaKnown RBP10.67□□□□□ -0.7
VPS13B-212ENST00000524330 RPAINQ86UA6 219 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 SLC47A2Q86VL8 602 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 UBL4BQ8N7F7 174 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 SLAIN1Q8ND83 568 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 TPCN2Q8NHX9 752 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 KAT5Q92993 513 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 KIF12Q96FN5 646 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 ZNF560Q96MR9 790 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 OSBPL9Q96SU4 736 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 OSMRQ99650 979 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 ZNF518BQ9C0D4 1074 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 MIS12Q9H081 205 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 VRTNQ9H8Y1 702 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 MRPL47Q9HD33 250 aaKnown RBP10.67□□□□□ -0.7
VPS13B-212ENST00000524330 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.67□□□□□ -0.7
VPS13B-212ENST00000524330 CHST12Q9NRB3 414 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 GTF2IRD1Q9UHL9 959 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 PUF60Q9UHX1 559 aaKnown RBP10.67□□□□□ -0.7
VPS13B-212ENST00000524330 GTF3C4Q9UKN8 822 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 KIAA1257Q9ULG3 409 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 UBQLN1Q9UMX0 589 aaKnown RBP10.67□□□□□ -0.7
VPS13B-212ENST00000524330 CNTN6Q9UQ52 1028 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 PIN4Q9Y237 131 aaKnown RBP10.67□□□□□ -0.7
VPS13B-212ENST00000524330 NOD1Q9Y239 953 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 CAPN6Q9Y6Q1 641 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 SCINQ9Y6U3 715 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 A0A0U1RQG5 324 aaPredicted RBP10.66□□□□□ -0.7
VPS13B-212ENST00000524330 TTLL13PA6NNM8 815 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 GPR182O15218 404 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 TREHO43280 583 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 FKTNO75072 461 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 CAND2O75155 1236 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 TRPA1O75762 1119 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 MTA2O94776 668 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 ABL1P00519 1130 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 MMEP08473 750 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 PAEPP09466 180 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 SKIP12755 728 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 ZSCAN20P17040 1043 aaPredicted RBP10.66□□□□□ -0.7
VPS13B-212ENST00000524330 POLR2BP30876 1174 aaKnown RBP10.66□□□□□ -0.7
VPS13B-212ENST00000524330 HOXC8P31273 242 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 PNPLA4P41247 253 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 SNX16P57768 344 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 FMO1Q01740 532 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 STILQ15468 1287 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 PPP2R5EQ16537 467 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 NBPF20Q3BBV1 942 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 MEI1Q5TIA1 1274 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 JADE1Q6IE81 842 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 C11orf63Q6NUN7 778 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 TMEM35BQ8NCS4 154 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 TRPV1Q8NER1 839 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 SLC35G2Q8TBE7 412 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 SLC20A1Q8WUM9 679 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 RUBCNQ92622 972 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 LENG1Q96BZ8 264 aaPredicted RBP10.66□□□□□ -0.7
VPS13B-212ENST00000524330 ZNF653Q96CK0 615 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 ZBTB10Q96DT7 871 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 ZIC5Q96T25 663 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 TSEN34Q9BSV6 310 aaKnown RBP10.66□□□□□ -0.7
VPS13B-212ENST00000524330 PACSIN1Q9BY11 444 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 ARHGAP39Q9C0H5 1083 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 AVENQ9NQS1 362 aaPredicted RBP10.66□□□□□ -0.7
VPS13B-212ENST00000524330 RNF186Q9NXI6 227 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 SAGE1Q9NXZ1 904 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 DPP3Q9NY33 737 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 DDX20Q9UHI6 824 aaKnown RBP10.66□□□□□ -0.7
VPS13B-212ENST00000524330 TFR2Q9UP52 801 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 NUB1Q9Y5A7 615 aa10.66□□□□□ -0.7
VPS13B-212ENST00000524330 PTPRJQ12913 1337 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 MOXD2PA6NHM9 499 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 RPS6KA5O75582 802 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 KIF4AO95239 1232 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 PGK1P00558 417 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 ITGB3P05106 788 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 CALB1P05937 261 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 NFICP08651 508 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 IQCF3P0C7M6 154 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 ACO1P21399 889 aaKnown RBP10.65□□□□□ -0.7
VPS13B-212ENST00000524330 CTGFP29279 349 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 RAB27AP51159 221 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 TAP1Q03518 808 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 TMEM62Q0P6H9 643 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 ELF2Q15723 593 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 SLC10A6Q3KNW5 377 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 MAP9Q49MG5 647 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 TWF2Q6IBS0 349 aaKnown RBP10.65□□□□□ -0.7
VPS13B-212ENST00000524330 SPOPLQ6IQ16 392 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 CXCL17Q6UXB2 119 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 RUFY4Q6ZNE9 571 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 SLFN11Q7Z7L1 901 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 CDR2LQ86X02 465 aaPredicted RBP10.65□□□□□ -0.7
VPS13B-212ENST00000524330 EFCAB13Q8IY85 973 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 LRRC52Q8N7C0 313 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 USP38Q8NB14 1042 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 ARRDC4Q8NCT1 418 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms