RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 ANO9A1A5B4 782 aa22.66■■□□□ 1.22
TRAPPC9-215ENST00000524162 EXTL3O43909 919 aa22.66■■□□□ 1.22
TRAPPC9-215ENST00000524162 AFMP43652 599 aa22.66■■□□□ 1.22
TRAPPC9-215ENST00000524162 NDUFA8P51970 172 aa22.66■■□□□ 1.22
TRAPPC9-215ENST00000524162 JADE1Q6IE81 842 aa22.66■■□□□ 1.22
TRAPPC9-215ENST00000524162 SLC8B1Q6J4K2 584 aa22.66■■□□□ 1.22
TRAPPC9-215ENST00000524162 PRSS55Q6UWB4 352 aaPredicted RBP22.66■■□□□ 1.22
TRAPPC9-215ENST00000524162 C12orf56Q8IXR9 622 aa22.66■■□□□ 1.22
TRAPPC9-215ENST00000524162 APPL2Q8NEU8 664 aa22.66■■□□□ 1.22
TRAPPC9-215ENST00000524162 CCDC34Q96HJ3 373 aa22.66■■□□□ 1.22
TRAPPC9-215ENST00000524162 IKZF4Q9H2S9 585 aa22.66■■□□□ 1.22
TRAPPC9-215ENST00000524162 MAN1C1Q9NR34 630 aa22.66■■□□□ 1.22
TRAPPC9-215ENST00000524162 USTQ9Y2C2 406 aa22.66■■□□□ 1.22
TRAPPC9-215ENST00000524162 MYO10Q9HD67 2058 aa22.66■■□□□ 1.22
TRAPPC9-215ENST00000524162 ARHGEF37A1IGU5 675 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 H7C4K7 107 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 KLRC4O43908 158 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 TBC1D4O60343 1298 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 POU2F2P09086 479 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 IGFBP6P24592 240 aaPredicted RBP22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 TKTP29401 623 aaKnown RBP22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 HOXA9P31269 272 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 BRCC3P46736 316 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 UVSSAQ2YD98 709 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 KANK3Q6NY19 840 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 ARMCX5Q6P1M9 558 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 GPD1LQ8N335 351 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 FSIP1Q8NA03 581 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 SCFD1Q8WVM8 642 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 BLZF1Q9H2G9 400 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 FBXW11Q9UKB1 542 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 MAFFQ9ULX9 164 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 PCDHB8Q9UN66 801 aa22.65■■□□□ 1.22
TRAPPC9-215ENST00000524162 PIRO00625 290 aa22.64■■□□□ 1.21
TRAPPC9-215ENST00000524162 SSTR3P32745 418 aaPredicted RBP22.64■■□□□ 1.21
TRAPPC9-215ENST00000524162 SURF1Q15526 300 aa22.64■■□□□ 1.21
TRAPPC9-215ENST00000524162 VARS2Q5ST30 1063 aaKnown RBP22.64■■□□□ 1.21
TRAPPC9-215ENST00000524162 RARS2Q5T160 578 aaKnown RBP22.64■■□□□ 1.21
TRAPPC9-215ENST00000524162 KREMEN2Q8NCW0 462 aa22.64■■□□□ 1.21
TRAPPC9-215ENST00000524162 GLIS3Q8NEA6 775 aa22.64■■□□□ 1.21
TRAPPC9-215ENST00000524162 GOLGA5Q8TBA6 731 aa22.64■■□□□ 1.21
TRAPPC9-215ENST00000524162 HPS3Q969F9 1004 aa22.64■■□□□ 1.21
TRAPPC9-215ENST00000524162 CBWD1Q9BRT8 395 aa22.64■■□□□ 1.21
TRAPPC9-215ENST00000524162 FAM213AQ9BRX8 229 aa22.64■■□□□ 1.21
TRAPPC9-215ENST00000524162 NR2E1Q9Y466 385 aa22.64■■□□□ 1.21
TRAPPC9-215ENST00000524162 PI4K2BG5E9Z4 385 aa22.63■■□□□ 1.21
TRAPPC9-215ENST00000524162 OAZ2O95190 189 aa22.63■■□□□ 1.21
TRAPPC9-215ENST00000524162 NFICP08651 508 aa22.63■■□□□ 1.21
TRAPPC9-215ENST00000524162 HNRNPA1P09651 372 aaKnown RBP eCLIP22.63■■□□□ 1.21
TRAPPC9-215ENST00000524162 MCM4P33991 863 aa22.63■■□□□ 1.21
TRAPPC9-215ENST00000524162 SPAG1Q07617 926 aa22.63■■□□□ 1.21
TRAPPC9-215ENST00000524162 C9orf57Q5W0N0 161 aa22.63■■□□□ 1.21
TRAPPC9-215ENST00000524162 KRBA2Q6ZNG9 492 aa22.63■■□□□ 1.21
TRAPPC9-215ENST00000524162 HS2ST1Q7LGA3 356 aa22.63■■□□□ 1.21
TRAPPC9-215ENST00000524162 PALB2Q86YC2 1186 aa22.63■■□□□ 1.21
TRAPPC9-215ENST00000524162 FAM212AQ96EL1 285 aa22.63■■□□□ 1.21
TRAPPC9-215ENST00000524162 DOCK8Q8NF50 2099 aa22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 TGFB1I1O43294 461 aa22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 ZMYND10O75800 440 aa22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 ZNF202O95125 648 aa22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 ALADP13716 330 aa22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 RPL17P18621 184 aaKnown RBP22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 TYMPP19971 482 aa22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 CASP1P29466 404 aa22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 OR1D2P34982 312 aa22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 LILRA4P59901 499 aa22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 KNOP1Q1ED39 458 aaKnown RBP22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 TMC5Q6UXY8 1006 aa22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 C12orf76Q8N812 135 aaPredicted RBP22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 ZNF461Q8TAF7 563 aa22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 CACTINQ8WUQ7 758 aaKnown RBP22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 AGPAT3Q9NRZ7 376 aa22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 EXOC1Q9NV70 894 aa22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 DPP3Q9NY33 737 aa22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 RBAKQ9NYW8 714 aaPredicted RBP22.62■■□□□ 1.21
TRAPPC9-215ENST00000524162 ZNF233A6NK53 670 aa22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 SPDYE4A6NLX3 237 aa22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 I3L4J1 428 aa22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 ABLIM3O94929 683 aa22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 TPGS2Q68CL5 300 aa22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 ZNF280DQ6N043 979 aa22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 EFCAB13Q8IY85 973 aa22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 GRAMD1CQ8IYS0 662 aa22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 CCDC47Q96A33 483 aaKnown RBP22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 SAAL1Q96ER3 474 aa22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 DOCK6Q96HP0 2047 aa22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 PRKD2Q9BZL6 878 aa22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 POMKQ9H5K3 350 aa22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 GDPD2Q9HCC8 539 aa22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 HSPBP1Q9NZL4 362 aa22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 CDY1Q9Y6F8 540 aa22.61■■□□□ 1.21
TRAPPC9-215ENST00000524162 TSC2P49815 1807 aa22.6■■□□□ 1.21
TRAPPC9-215ENST00000524162 CCDC195A0A1B0GUA6 201 aa22.6■■□□□ 1.21
TRAPPC9-215ENST00000524162 GOLGA6L4A6NEF3 574 aa22.6■■□□□ 1.21
TRAPPC9-215ENST00000524162 RHOBTB3O94955 611 aa22.6■■□□□ 1.21
TRAPPC9-215ENST00000524162 KIF20AO95235 890 aa22.6■■□□□ 1.21
TRAPPC9-215ENST00000524162 RPN1P04843 607 aaKnown RBP22.6■■□□□ 1.21
TRAPPC9-215ENST00000524162 CYP11A1P05108 521 aa22.6■■□□□ 1.21
TRAPPC9-215ENST00000524162 PNPLA4P41247 253 aa22.6■■□□□ 1.21
TRAPPC9-215ENST00000524162 DPYDQ12882 1025 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms