RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 CDC23Q9UJX2 597 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 COL1A2P08123 1366 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 TRPM7Q96QT4 1865 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 PLXNA1Q9UIW2 1896 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 ZNFX1Q9P2E3 1918 aaKnown RBP7.4□□□□□ -1.22
CSMD1-211ENST00000523062 A0A087X0T9 212 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 MACROD2A1Z1Q3 448 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 BTNL10A8MVZ5 291 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 ZBTB42B2RXF5 422 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 MAGEB2O15479 319 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 TADA3O75528 432 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 SNAI1O95863 264 aaPredicted RBP7.4□□□□□ -1.22
CSMD1-211ENST00000523062 PRKCBP05771 671 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 FAM228BP0C875 321 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 ALAS2P22557 587 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 ADCYAP1R1P41586 468 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 MATR3P43243 847 aaKnown RBP eCLIP7.4□□□□□ -1.22
CSMD1-211ENST00000523062 GPC3P51654 580 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 AMPD2Q01433 879 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 MAP2K1Q02750 393 aaPredicted RBP7.4□□□□□ -1.22
CSMD1-211ENST00000523062 TNP2Q05952 138 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 LAMTOR4Q0VGL1 99 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 BMS1Q14692 1282 aaKnown RBP7.4□□□□□ -1.22
CSMD1-211ENST00000523062 KIF22Q14807 665 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 PSMD6Q15008 389 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 ENOX2Q16206 610 aaKnown RBP7.4□□□□□ -1.22
CSMD1-211ENST00000523062 DUSP28Q4G0W2 176 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 ZNF571Q7Z3V5 609 aaPredicted RBP7.4□□□□□ -1.22
CSMD1-211ENST00000523062 MTERF4Q7Z6M4 381 aaKnown RBP7.4□□□□□ -1.22
CSMD1-211ENST00000523062 LRRC71Q8N4P6 559 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 RNF10Q8N5U6 811 aaKnown RBP7.4□□□□□ -1.22
CSMD1-211ENST00000523062 CEP112Q8N8E3 955 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 FBXL13Q8NEE6 735 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 RHBDD1Q8TEB9 315 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 PRPF31Q8WWY3 499 aaKnown RBP7.4□□□□□ -1.22
CSMD1-211ENST00000523062 ANKRD7Q92527 254 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 CCDC127Q96BQ5 260 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 NT5C1BQ96P26 610 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 NOX5Q96PH1 765 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 FNBP1Q96RU3 617 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 TINF2Q9BSI4 451 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 MSTO1Q9BUK6 570 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 TARS2Q9BW92 718 aaKnown RBP7.4□□□□□ -1.22
CSMD1-211ENST00000523062 MRPL4Q9BYD3 311 aaKnown RBP7.4□□□□□ -1.22
CSMD1-211ENST00000523062 CCDC113Q9H0I3 377 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 ABHD16BQ9H3Z7 469 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 SUGCTQ9HAC7 445 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 ANKFY1Q9P2R3 1169 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 SUCLA2Q9P2R7 463 aaPredicted RBP7.4□□□□□ -1.22
CSMD1-211ENST00000523062 CPA4Q9UI42 421 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 AGO2Q9UKV8 859 aaKnown RBP7.4□□□□□ -1.22
CSMD1-211ENST00000523062 ZHX1Q9UKY1 873 aaPredicted RBP7.4□□□□□ -1.22
CSMD1-211ENST00000523062 NENFQ9UMX5 172 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 TFR2Q9UP52 801 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 COQ4Q9Y3A0 265 aa7.4□□□□□ -1.22
CSMD1-211ENST00000523062 A0A0B4J269 797 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 EFCAB8A8MWE9 144 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 IGF2BP3O00425 579 aaKnown RBP eCLIP7.39□□□□□ -1.23
CSMD1-211ENST00000523062 ATXN7O15265 892 aaPredicted RBP7.39□□□□□ -1.23
CSMD1-211ENST00000523062 ASAP2O43150 1006 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 ZC3H11AO75152 810 aaKnown RBP eCLIP7.39□□□□□ -1.23
CSMD1-211ENST00000523062 PPFIA4O75335 1185 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 TOM1L1O75674 476 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 MOCS3O95396 460 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 C22orf31O95567 290 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 DLATP10515 647 aaKnown RBP7.39□□□□□ -1.23
CSMD1-211ENST00000523062 HOXD8P13378 290 aaPredicted RBP7.39□□□□□ -1.23
CSMD1-211ENST00000523062 MFAP3P55082 362 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 INHBEP58166 350 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 NLRP11P59045 1033 aaKnown RBP7.39□□□□□ -1.23
CSMD1-211ENST00000523062 TUBB4BP68371 445 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 CKAP4Q07065 602 aaKnown RBP7.39□□□□□ -1.23
CSMD1-211ENST00000523062 SREBF2Q12772 1141 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 DRP2Q13474 957 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 ACVR2BQ13705 512 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 ELF2Q15723 593 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 NAB2Q15742 525 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 MAPK6Q16659 721 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 IFI16Q16666 785 aaKnown RBP7.39□□□□□ -1.23
CSMD1-211ENST00000523062 ARHGAP44Q17R89 818 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 GJC2Q5T442 439 aaPredicted RBP7.39□□□□□ -1.23
CSMD1-211ENST00000523062 PAPD7Q5XG87 772 aaKnown RBP7.39□□□□□ -1.23
CSMD1-211ENST00000523062 IQSEC1Q6DN90 963 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 PHLDB3Q6NSJ2 640 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 RGMBQ6NW40 437 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 TRAPPC11Q7Z392 1133 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 SRGAP1Q7Z6B7 1085 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 ARHGEF19Q8IW93 802 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 BRSK2Q8IWQ3 736 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 RNF149Q8NC42 400 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 LRRN4CLQ8ND94 238 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 OR6J1Q8NGC5 347 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 NPLOC4Q8TAT6 608 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 AFG1LQ8WV93 481 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 UBXN4Q92575 508 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 GOLGA1Q92805 767 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 FAM81BQ96LP2 452 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 CGRRF1Q99675 332 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 GPR88Q9GZN0 384 aa7.39□□□□□ -1.23
CSMD1-211ENST00000523062 UBE2TQ9NPD8 197 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms