RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 ZBTB41Q5SVQ8 909 aa16.46■□□□□ 0.23
PCM1-218ENST00000523055 SLC39A4Q6P5W5 647 aa16.46■□□□□ 0.23
PCM1-218ENST00000523055 ZPBP2Q6X784 338 aa16.46■□□□□ 0.23
PCM1-218ENST00000523055 SV2BQ7L1I2 683 aa16.46■□□□□ 0.23
PCM1-218ENST00000523055 NELL1Q92832 810 aa16.46■□□□□ 0.23
PCM1-218ENST00000523055 BICD1Q96G01 975 aa16.46■□□□□ 0.23
PCM1-218ENST00000523055 DDX23Q9BUQ8 820 aaKnown RBP16.46■□□□□ 0.23
PCM1-218ENST00000523055 COLEC11Q9BWP8 271 aa16.46■□□□□ 0.23
PCM1-218ENST00000523055 MRPL17Q9NRX2 175 aaKnown RBP16.46■□□□□ 0.23
PCM1-218ENST00000523055 ADAM28Q9UKQ2 775 aa16.46■□□□□ 0.23
PCM1-218ENST00000523055 NUMBLQ9Y6R0 609 aa16.46■□□□□ 0.23
PCM1-218ENST00000523055 ATRXP46100 2492 aa16.46■□□□□ 0.23
PCM1-218ENST00000523055 PATJQ8NI35 1801 aa16.46■□□□□ 0.23
PCM1-218ENST00000523055 MIA3Q5JRA6 1907 aa16.46■□□□□ 0.23
PCM1-218ENST00000523055 CNOT1A5YKK6 2376 aaKnown RBP16.46■□□□□ 0.22
PCM1-218ENST00000523055 SMIM28A0A1B0GU29 152 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 HNRNPDLO14979 420 aaKnown RBP16.45■□□□□ 0.22
PCM1-218ENST00000523055 CUTAO60888 179 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 NR1I2O75469 434 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 URODP06132 367 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 TNFSF9P41273 254 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 MATR3P43243 847 aaKnown RBP eCLIP16.45■□□□□ 0.224e-7■■■■□ 22.9
PCM1-218ENST00000523055 GLUD2P49448 558 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 ST3GAL2Q16842 350 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 KIAA0319Q5VV43 1072 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 ALKAL1Q6UXT8 129 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 APBB1IPQ7Z5R6 666 aaPredicted RBP16.45■□□□□ 0.22
PCM1-218ENST00000523055 ZBTB44Q8NCP5 570 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 SMG7Q92540 1137 aaKnown RBP16.45■□□□□ 0.22
PCM1-218ENST00000523055 KCNN1Q92952 543 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 FGFBP2Q9BYJ0 223 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 TBC1D7Q9P0N9 293 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 KCNG1Q9UIX4 513 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 PCDHA7Q9UN72 937 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 MTF2Q9Y483 593 aaPredicted RBP16.45■□□□□ 0.22
PCM1-218ENST00000523055 DCDC2BA2VCK2 349 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 H0YCG3 227 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 SPTLC1O15269 473 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 CLDN3O15551 220 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 FAM189A1O60320 539 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 LILRB5O75023 590 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 ADRB1P08588 477 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 CXCL8P10145 99 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 PDIA4P13667 645 aaKnown RBP16.45■□□□□ 0.22
PCM1-218ENST00000523055 LIG4P49917 911 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 CLCNKBP51801 687 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 YARSP54577 528 aaKnown RBP16.45■□□□□ 0.22
PCM1-218ENST00000523055 GPC5P78333 572 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 GTF2BQ00403 316 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 MCL1Q07820 350 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 SLC10A6Q3KNW5 377 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 XKR4Q5GH76 650 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 RTP2Q5QGT7 225 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 C3orf58Q8NDZ4 430 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 DHX58Q96C10 678 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 ACAP3Q96P50 834 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 RXFP1Q9HBX9 757 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 NCDNQ9UBB6 729 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 STK39Q9UEW8 545 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 FBXO4Q9UKT5 387 aa16.45■□□□□ 0.22
PCM1-218ENST00000523055 SCN1AP35498 2009 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 ANKRD63C9JTQ0 380 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 TADA2AO75478 443 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 PIGRP01833 764 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 IDEP14735 1019 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 RPL17P18621 184 aaKnown RBP16.44■□□□□ 0.22
PCM1-218ENST00000523055 ME1P48163 572 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 CASP5P51878 434 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 SPAG1Q07617 926 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 KCNA1Q09470 495 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 PRSS55Q6UWB4 352 aaPredicted RBP16.44■□□□□ 0.22
PCM1-218ENST00000523055 CD300LGQ6UXG3 332 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 MAP4K3Q8IVH8 894 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 GLYCTKQ8IVS8 523 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 FGF14Q92915 247 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 C18orf25Q96B23 403 aaPredicted RBP16.44■□□□□ 0.22
PCM1-218ENST00000523055 EPC1Q9H2F5 836 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 PARD6AQ9NPB6 346 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 TOPORSQ9NS56 1045 aaPredicted RBP16.44■□□□□ 0.22
PCM1-218ENST00000523055 CHST7Q9NS84 486 aa16.44■□□□□ 0.22
PCM1-218ENST00000523055 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.44■□□□□ 0.22
PCM1-218ENST00000523055 KANSL1LA0AUZ9 987 aa16.43■□□□□ 0.22
PCM1-218ENST00000523055 I3L4J1 428 aa16.43■□□□□ 0.22
PCM1-218ENST00000523055 SF3B1O75533 1304 aaKnown RBP eCLIP16.43■□□□□ 0.221e-6■■■□□ 17.2
PCM1-218ENST00000523055 PPP1R37O75864 691 aa16.43■□□□□ 0.22
PCM1-218ENST00000523055 GLUD1P00367 558 aa16.43■□□□□ 0.22
PCM1-218ENST00000523055 ADH1AP07327 375 aa16.43■□□□□ 0.22
PCM1-218ENST00000523055 SPATA31D3P0C874 917 aa16.43■□□□□ 0.22
PCM1-218ENST00000523055 SDHBP21912 280 aa16.43■□□□□ 0.22
PCM1-218ENST00000523055 TSC2P49815 1807 aa16.43■□□□□ 0.22
PCM1-218ENST00000523055 DSG1Q02413 1049 aa16.43■□□□□ 0.22
PCM1-218ENST00000523055 SPATA31D4Q6ZUB0 917 aa16.43■□□□□ 0.22
PCM1-218ENST00000523055 GET4Q7L5D6 327 aaPredicted RBP16.43■□□□□ 0.22
PCM1-218ENST00000523055 GPR161Q8N6U8 529 aaKnown RBP16.43■□□□□ 0.22
PCM1-218ENST00000523055 BORCS6Q96GS4 357 aa16.43■□□□□ 0.22
PCM1-218ENST00000523055 CNTN3Q9P232 1028 aa16.43■□□□□ 0.22
PCM1-218ENST00000523055 TUBGCP4Q9UGJ1 667 aa16.43■□□□□ 0.22
PCM1-218ENST00000523055 PCDHGA2Q9Y5H1 932 aa16.43■□□□□ 0.22
PCM1-218ENST00000523055 FRMD3A2A2Y4 597 aa16.42■□□□□ 0.22
PCM1-218ENST00000523055 PRR5-ARHGAP8B1AHC4 643 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms