RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 IGSF22Q8N9C0 903 aa16.72■□□□□ 0.27
TRAPPC9-213ENST00000522504 FBXO18Q8NFZ0 1043 aa16.72■□□□□ 0.27
TRAPPC9-213ENST00000522504 SUSD3Q96L08 255 aa16.72■□□□□ 0.27
TRAPPC9-213ENST00000522504 ACAP3Q96P50 834 aa16.72■□□□□ 0.27
TRAPPC9-213ENST00000522504 TMEM134Q9H6X4 195 aa16.72■□□□□ 0.27
TRAPPC9-213ENST00000522504 BRD9Q9H8M2 597 aa16.72■□□□□ 0.27
TRAPPC9-213ENST00000522504 ZFP14Q9HCL3 533 aa16.72■□□□□ 0.27
TRAPPC9-213ENST00000522504 PARD6AQ9NPB6 346 aa16.72■□□□□ 0.27
TRAPPC9-213ENST00000522504 SLC38A7Q9NVC3 462 aa16.72■□□□□ 0.27
TRAPPC9-213ENST00000522504 SLC16A4O15374 487 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 NCAM2O15394 837 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 MICAL2O94851 1124 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 SEC24BO95487 1268 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 VNN2O95498 520 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 MCF2P10911 925 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 GDI1P31150 447 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 RPL9P32969 192 aaKnown RBP16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 ATXN1P54253 815 aaKnown RBP16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 TWF1Q12792 350 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 SLC10A6Q3KNW5 377 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 RNF19BQ6ZMZ0 732 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 C1orf186Q6ZWK4 172 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 PDZD4Q76G19 769 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 APBB1IPQ7Z5R6 666 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 SNX29Q8TEQ0 813 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 SMARCD2Q92925 531 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 RSPRY1Q96DX4 576 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 BORCS6Q96GS4 357 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 TBC1D32Q96NH3 1257 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 MMTAG2Q9BU76 263 aaKnown RBP16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 TRMT61BQ9BVS5 477 aaKnown RBP16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 CHRDQ9H2X0 955 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 ZNF334Q9HCZ1 680 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 KMT5AQ9NQR1 393 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 TUBGCP4Q9UGJ1 667 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 MRPS17Q9Y2R5 130 aaKnown RBP16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 NUB1Q9Y5A7 615 aa16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 KMT2BQ9UMN6 2715 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC9-213ENST00000522504 COL4A2P08572 1712 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 CACNA1BQ00975 2339 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 H7C4K7 107 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 ARNTLO00327 626 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 PTGDRQ13258 359 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 DMP1Q13316 513 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 GAS6Q14393 721 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 PDIA5Q14554 519 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 TPGS2Q68CL5 300 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 RINT1Q6NUQ1 792 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 MPZL3Q6UWV2 235 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 DDX12PQ92771 950 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 TCHPQ9BT92 498 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 HAPLN2Q9GZV7 340 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 CRISPLD1Q9H336 500 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 AFF4Q9UHB7 1163 aaKnown RBP16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 PCDHB6Q9Y5E3 794 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 CHD8Q9HCK8 2581 aa16.7■□□□□ 0.26
TRAPPC9-213ENST00000522504 CFAP47Q6ZTR5 3102 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 ZNF197O14709 1029 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 MYL4P12829 197 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 PSMC3P17980 439 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 MCM4P33991 863 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 TRAPPC10P48553 1259 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 EPHA5P54756 1037 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 SPAG1Q07617 926 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 TEAD2Q15562 447 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 LPAL2Q16609 132 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 WDR44Q5JSH3 913 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 CYP4A22Q5TCH4 519 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 SHKBP1Q8TBC3 707 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 ZSCAN18Q8TBC5 510 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 FAM3CQ92520 227 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 LMAN1LQ9HAT1 526 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 DAXXQ9UER7 740 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 LIMCH1Q9UPQ0 1083 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 DNM3Q9UQ16 869 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 TIMM13Q9Y5L4 95 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 PIAS3Q9Y6X2 628 aa16.69■□□□□ 0.26
TRAPPC9-213ENST00000522504 LAMA1P25391 3075 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 MAN2B1O00754 1011 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 OR4Q2P0C623 313 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 SATB1Q01826 763 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 RAD51AP2Q09MP3 1159 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 ZNF280DQ6N043 979 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 MAMSTRQ6ZN01 415 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 GPIHBP1Q8IV16 184 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 TMEM161BQ8NDZ6 487 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 IRF7Q92985 503 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 ZNF512Q96ME7 567 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 CNTNAP3BQ96NU0 1288 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 LLPHQ9BRT6 129 aaKnown RBP16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 NTPCRQ9BSD7 190 aaKnown RBP16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 LRRC3Q9BY71 257 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 FAM126AQ9BYI3 521 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 CNTNAP3Q9BZ76 1288 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 DNAJC25Q9H1X3 360 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 TRPV4Q9HBA0 871 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 TRPV5Q9NQA5 729 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 ANKFY1Q9P2R3 1169 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 PCDHB8Q9UN66 801 aa16.68■□□□□ 0.26
TRAPPC9-213ENST00000522504 RBM19Q9Y4C8 960 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms