RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 HNRNPLLQ8WVV9 542 aaKnown RBP9.92□□□□□ -0.82
TRAPPC9-212ENST00000521944 GJA10Q969M2 543 aa9.92□□□□□ -0.82
TRAPPC9-212ENST00000521944 UBN1Q9NPG3 1134 aa9.92□□□□□ -0.82
TRAPPC9-212ENST00000521944 DISC1Q9NRI5 854 aa9.92□□□□□ -0.82
TRAPPC9-212ENST00000521944 ERICH2A1L162 156 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 WDR64B1ANS9 1081 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 E7EWF7 191 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 MEFVO15553 781 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 MAFO75444 373 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 TADA2AO75478 443 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 AKAP3O75969 853 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 KIF4AO95239 1232 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 CCDC192P0DO97 292 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 FAM193AP78312 1265 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 IRX4P78413 519 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 FGD1P98174 961 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 CREB5Q02930 508 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 LRRC32Q14392 662 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 NR6A1Q15406 480 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 DGKKQ5KSL6 1271 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 TMTC3Q6ZXV5 915 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 PIP4P1Q86T03 277 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 CEP57Q86XR8 500 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 MFSD6LQ8IWD5 586 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 CHCHD4Q8N4Q1 142 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 SMARCD2Q92925 531 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 CRELD1Q96HD1 420 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 LRIG1Q96JA1 1093 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 CXCL16Q9H2A7 254 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 TRPV4Q9HBA0 871 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 SNTG2Q9NY99 539 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 SAMM50Q9Y512 469 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 COL12A1Q99715 3063 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 PLXNB3Q9ULL4 1909 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 PI4KAP42356 2102 aa9.91□□□□□ -0.82
TRAPPC9-212ENST00000521944 SF3B1O75533 1304 aaKnown RBP eCLIP9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 PDCD11Q14690 1871 aaKnown RBP9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 MGAQ8IWI9 3026 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 ARHGEF37A1IGU5 675 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 SPECC1L-ADORA2AF8WAN1 911 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 ZNF263O14978 683 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 MICAL2O94851 1124 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 PLA2G2AP14555 144 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 PTPN2P17706 415 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 AKAP5P24588 427 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 GNAQP50148 359 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 DNM2P50570 870 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 PTH1RQ03431 593 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 TRDNQ13061 729 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 HSP90AA2PQ14568 343 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 PON2Q15165 354 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 JAKMIP3Q5VZ66 844 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 CD300LGQ6UXG3 332 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 ANO5Q75V66 913 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 RTL10Q7L3V2 364 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 CNNM3Q8NE01 707 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 TTC8Q8TAM2 541 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 CHFRQ96EP1 664 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 NXF3Q9H4D5 531 aaKnown RBP9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 TMEM9BQ9NQ34 198 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 KLK14Q9P0G3 267 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 GIT1Q9Y2X7 761 aa9.9□□□□□ -0.82
TRAPPC9-212ENST00000521944 SMCO2A6NFE2 343 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 HEPACAM2A8MVW5 462 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 TSPAN1O60635 241 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 SRGAP2CP0DJJ0 459 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 GJA1P17302 382 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 ADCY7P51828 1080 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 NAPAP54920 295 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 SIM1P81133 766 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 AP3B2Q13367 1082 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 NAB2Q15742 525 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 TMEM132AQ24JP5 1023 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 UAP1L1Q3KQV9 507 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 PRR16Q569H4 304 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 XKR3Q5GH77 459 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 SRGAP1Q7Z6B7 1085 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 RAB44Q7Z6P3 723 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 NCOA7Q8NI08 942 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 DEPDC1BQ8WUY9 529 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 PRPF31Q8WWY3 499 aaKnown RBP9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 CPB2Q96IY4 423 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 CORO1BQ9BR76 489 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 APOL6Q9BWW8 343 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 UNC45AQ9H3U1 944 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 C8orf33Q9H7E9 229 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 DIAPH3Q9NSV4 1193 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 GTSE1Q9NYZ3 720 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 MTRRQ9UBK8 725 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 RAXQ9Y2V3 346 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 COL4A3BPQ9Y5P4 624 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 TEX15Q9BXT5 2789 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 PTPRQQ9UMZ3 2332 aa9.89□□□□□ -0.83
TRAPPC9-212ENST00000521944 GOLGA4Q13439 2230 aaKnown RBP9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 SHROOM3Q8TF72 1996 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 CASTOR2A6NHX0 329 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 CHADO15335 359 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 MSH4O15457 936 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 SEC24AO95486 1093 aa9.88□□□□□ -0.83
TRAPPC9-212ENST00000521944 FGFR3P22607 806 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms