RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 DENND2AQ9ULE3 1009 aa8.35□□□□□ -1.07
SPIDR-215ENST00000521798 DDX60Q8IY21 1712 aaKnown RBP8.34□□□□□ -1.07
SPIDR-215ENST00000521798 ABCC4O15439 1325 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 A0A1W2PQ27 194 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 A0A1W2PQ64 194 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 A0A1W2PQC6 194 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 A0A1W2PQD8 194 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 SLC16A6O15403 523 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 CELA3BP08861 270 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 FAM163BP0C2L3 166 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 HSD3B1P14060 373 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 MCAMP43121 646 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 RARSP54136 660 aaKnown RBP8.34□□□□□ -1.07
SPIDR-215ENST00000521798 DSC2Q02487 901 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 MVKQ03426 396 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 GCKRQ14397 625 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 SF3B3Q15393 1217 aaKnown RBP8.34□□□□□ -1.07
SPIDR-215ENST00000521798 SLC4A8Q2Y0W8 1093 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 MUM1L1Q5H9M0 696 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 THEMIS2Q5TEJ8 643 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 PRAMEF18Q5VWM3 479 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 MIGA2Q7L4E1 593 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 CABP7Q86V35 215 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 MYCT1Q8N699 235 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 RPGRQ92834 1020 aaKnown RBP8.34□□□□□ -1.07
SPIDR-215ENST00000521798 RBM17Q96I25 401 aaKnown RBP8.34□□□□□ -1.07
SPIDR-215ENST00000521798 ZC3H10Q96K80 434 aaKnown RBP8.34□□□□□ -1.07
SPIDR-215ENST00000521798 CRAMP1Q96RY5 1269 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 MYLK2Q9H1R3 596 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 ATP6V0A4Q9HBG4 840 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 SMC4Q9NTJ3 1288 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 TAF6LQ9Y6J9 622 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 SNED1Q8TER0 1413 aa8.34□□□□□ -1.07
SPIDR-215ENST00000521798 PTPRCP08575 1304 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 CDHR2Q9BYE9 1310 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 LAMB2P55268 1798 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 A0A087WV62 115 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 GLI4P10075 376 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 GRIN1Q05586 938 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 ZNF543Q08ER8 600 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 IL10RAQ13651 578 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 CACNA1SQ13698 1873 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 PUM3Q15397 648 aaKnown RBP8.33□□□□□ -1.08
SPIDR-215ENST00000521798 FAM209BQ5JX69 171 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 LCE2AQ5TA79 106 aaPredicted RBP8.33□□□□□ -1.08
SPIDR-215ENST00000521798 CEP128Q6ZU80 1094 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 NETO2Q8NC67 525 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 KAT5Q92993 513 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 GCC1Q96CN9 775 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 MPP4Q96JB8 637 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 DBNDD2Q9BQY9 259 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 OSBPL1AQ9BXW6 950 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 AP5M1Q9H0R1 490 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 ACSL6Q9UKU0 697 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 TPCN1Q9ULQ1 816 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 GPR52Q9Y2T5 361 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 SNX13Q9Y5W8 968 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 RPS6KL1Q9Y6S9 549 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 COL4A1P02462 1669 aa8.33□□□□□ -1.08
SPIDR-215ENST00000521798 SGSM2O43147 1006 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 PCDH8O95206 1070 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 FAHP16930 419 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 STT3AP46977 705 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 RGS3P49796 1198 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 GRAPQ13588 217 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 CCDC93Q567U6 631 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 JAKMIP3Q5VZ66 844 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 PPP4R3AQ6IN85 833 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 GALNT18Q6P9A2 607 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 LMBR1LQ6UX01 489 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 BTNL9Q6UXG8 535 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 UBE3BQ7Z3V4 1068 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 CLASRPQ8N2M8 674 aaKnown RBP8.32□□□□□ -1.08
SPIDR-215ENST00000521798 ZSCAN18Q8TBC5 510 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-215ENST00000521798 GRAPLQ8TC17 118 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-215ENST00000521798 ASB11Q8WXH4 323 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 TRIM63Q969Q1 353 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 ARL8AQ96BM9 186 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 TBATAQ96M53 351 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 NT5C1BQ96P26 610 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 ADI1Q9BV57 179 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 GREM2Q9H772 168 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 EVLQ9UI08 416 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-215ENST00000521798 PALD1Q9ULE6 856 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 WASF3Q9UPY6 502 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 FER1L6Q2WGJ9 1857 aa8.32□□□□□ -1.08
SPIDR-215ENST00000521798 PHGDHO43175 533 aaKnown RBP8.31□□□□□ -1.08
SPIDR-215ENST00000521798 BBOX1O75936 387 aa8.31□□□□□ -1.08
SPIDR-215ENST00000521798 ZGLP1P0C6A0 271 aa8.31□□□□□ -1.08
SPIDR-215ENST00000521798 GPR15P49685 360 aa8.31□□□□□ -1.08
SPIDR-215ENST00000521798 CTSWP56202 376 aa8.31□□□□□ -1.08
SPIDR-215ENST00000521798 GEMIN4P57678 1058 aaKnown RBP8.31□□□□□ -1.08
SPIDR-215ENST00000521798 ICA1Q05084 483 aa8.31□□□□□ -1.08
SPIDR-215ENST00000521798 DBPQ10586 325 aaPredicted RBP8.31□□□□□ -1.08
SPIDR-215ENST00000521798 NFIAQ12857 509 aa8.31□□□□□ -1.08
SPIDR-215ENST00000521798 BLMHQ13867 455 aa8.31□□□□□ -1.08
SPIDR-215ENST00000521798 CCDC157Q569K6 752 aa8.31□□□□□ -1.08
SPIDR-215ENST00000521798 CCDC178Q5BJE1 867 aa8.31□□□□□ -1.08
SPIDR-215ENST00000521798 TTC7BQ86TV6 843 aa8.31□□□□□ -1.08
SPIDR-215ENST00000521798 ALYREFQ86V81 257 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms