RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 PPP2R3AQ06190 1150 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 CLUL1Q15846 466 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 UPP1Q16831 310 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 SPECC1Q5M775 1068 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 LLGL2Q6P1M3 1020 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 CNNM4Q6P4Q7 775 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 SYCE2Q6PIF2 218 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 ANKS3Q6ZW76 656 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 ZBTB33Q86T24 672 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 NT5DC4Q86YG4 428 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 VN1R2Q8NFZ6 395 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 FBXL18Q96ME1 805 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 CLIC6Q96NY7 704 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 VN1R3Q9BXE9 311 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 ASB7Q9H672 318 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 MRPL44Q9H9J2 332 aaKnown RBP11.11□□□□□ -0.63
TRIM35-204ENST00000521283 ANKFY1Q9P2R3 1169 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 USP25Q9UHP3 1055 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 DERAQ9Y315 318 aa11.11□□□□□ -0.63
TRIM35-204ENST00000521283 A0A0B4J269 797 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 FRMD3A2A2Y4 597 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 CASTOR2A6NHX0 329 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 LOC730098B7Z3J9 87 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 SYN3O14994 580 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 TEX28O15482 410 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 DCXO43602 365 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 PAPLNO95428 1278 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 MYL1P05976 194 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 ADRB2P07550 413 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 FGFR3P22607 806 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 ME1P48163 572 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 MMP16P51512 607 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 USP46P62068 366 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 KRT85P78386 507 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 UVSSAQ2YD98 709 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 HERC4Q5GLZ8 1057 aaPredicted RBP11.1□□□□□ -0.63
TRIM35-204ENST00000521283 FAM171A1Q5VUB5 890 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 USP49Q70CQ1 688 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 DYMQ7RTS9 669 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 RIN2Q8WYP3 895 aaPredicted RBP11.1□□□□□ -0.63
TRIM35-204ENST00000521283 STAMQ92783 540 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 NECAB3Q96P71 396 aaPredicted RBP11.1□□□□□ -0.63
TRIM35-204ENST00000521283 ACCSQ96QU6 501 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 GPR62Q9BZJ7 368 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 RPF1Q9H9Y2 349 aaKnown RBP11.1□□□□□ -0.63
TRIM35-204ENST00000521283 KBTBD4Q9NVX7 518 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 ZDHHC7Q9NXF8 308 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 TFIP11Q9UBB9 837 aaKnown RBP11.1□□□□□ -0.63
TRIM35-204ENST00000521283 RCOR1Q9UKL0 485 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 MAFFQ9ULX9 164 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 UBQLN1Q9UMX0 589 aaKnown RBP11.1□□□□□ -0.63
TRIM35-204ENST00000521283 BACE2Q9Y5Z0 518 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 STYXL1Q9Y6J8 313 aa11.1□□□□□ -0.63
TRIM35-204ENST00000521283 TTC26A0AVF1 554 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 MYMKA6NI61 221 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 H7C4K7 107 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 C2CD2LO14523 706 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 GPR37L1O60883 481 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 KIF4AO95239 1232 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 HNRNPA1P09651 372 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRIM35-204ENST00000521283 LRPAP1P30533 357 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 CLCNKBP51801 687 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 OSTNP61366 133 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 SNRPFP62306 86 aaKnown RBP11.09□□□□□ -0.63
TRIM35-204ENST00000521283 FOXC1Q12948 553 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 SLC10A6Q3KNW5 377 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 GPR149Q86SP6 731 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 APPL2Q8NEU8 664 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 AUTS2Q8WXX7 1259 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 ACSF2Q96CM8 615 aaPredicted RBP11.09□□□□□ -0.63
TRIM35-204ENST00000521283 DNAJC19Q96DA6 116 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 CCDC34Q96HJ3 373 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 FIZ1Q96SL8 496 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 USB1Q9BQ65 265 aaKnown RBP11.09□□□□□ -0.63
TRIM35-204ENST00000521283 MSTO1Q9BUK6 570 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 SCAND2PQ9GZW5 306 aaPredicted RBP11.09□□□□□ -0.63
TRIM35-204ENST00000521283 PANK4Q9NVE7 773 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 USP20Q9Y2K6 914 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 NUB1Q9Y5A7 615 aa11.09□□□□□ -0.63
TRIM35-204ENST00000521283 PODXLO00592 558 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 GCNT3O95395 438 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 POU2F2P09086 479 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 HARSP12081 509 aaKnown RBP11.08□□□□□ -0.64
TRIM35-204ENST00000521283 IDEP14735 1019 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 EPCAMP16422 314 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 GARTP22102 1010 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 HOXA9P31269 272 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 GUCA2AQ02747 115 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 PSMD5Q16401 504 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 PKDCCQ504Y2 493 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 GLRA4Q5JXX5 417 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 TMEM31Q5JXX7 168 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 L1TD1Q5T7N2 865 aaKnown RBP11.08□□□□□ -0.64
TRIM35-204ENST00000521283 LIN9Q5TKA1 542 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 ADALQ6DHV7 355 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 LILRA6Q6PI73 481 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 CCDC149Q6ZUS6 474 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 OTOP3Q7RTS5 596 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 TAS1R1Q7RTX1 841 aa11.08□□□□□ -0.64
TRIM35-204ENST00000521283 SFR1Q86XK3 245 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms