RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 TCEAL5Q5H9L2 206 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 TRAPPC11Q7Z392 1133 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 MRPL43Q8N983 215 aaKnown RBP13.38□□□□□ -0.27
CLK4-208ENST00000520957 FNBP1Q96RU3 617 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 TSG101Q99816 390 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 ZBP1Q9H171 429 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 CHST7Q9NS84 486 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 AGAP1Q9UPQ3 857 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 TIMM13Q9Y5L4 95 aaPredicted RBP13.38□□□□□ -0.27
CLK4-208ENST00000520957 TRIP11Q15643 1979 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 C2orf71A6NGG8 1288 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 TMEM189-UBE2V1I3L0A0 370 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 SOD2P04179 222 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 TMEM191BP0C7N4 346 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 CTSAP10619 480 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 TKTP29401 623 aaKnown RBP13.37□□□□□ -0.27
CLK4-208ENST00000520957 VAMP7P51809 220 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 CLDN10P78369 228 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 PTPROQ16827 1216 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 KIAA0319Q5VV43 1072 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 PRSS55Q6UWB4 352 aaPredicted RBP13.37□□□□□ -0.27
CLK4-208ENST00000520957 WDR49Q8IV35 697 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 TSPAN18Q96SJ8 248 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 CGRRF1Q99675 332 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 SRRTQ9BXP5 876 aaKnown RBP13.37□□□□□ -0.27
CLK4-208ENST00000520957 LMAN2LQ9H0V9 348 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 IGFLR1Q9H665 355 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 LMCD1Q9NZU5 365 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 RWDD2AQ9UIY3 292 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 NUB1Q9Y5A7 615 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 KIAA1671Q9BY89 1806 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 SF3B1O75533 1304 aaKnown RBP eCLIP13.37□□□□□ -0.271e-14■■■■■ 94.8
CLK4-208ENST00000520957 XPOTO43592 962 aaKnown RBP13.37□□□□□ -0.27
CLK4-208ENST00000520957 LRRN2O75325 713 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 C4BPAP04003 597 aaKnown RBP13.37□□□□□ -0.27
CLK4-208ENST00000520957 KRT19P08727 400 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 RPL17P18621 184 aaKnown RBP13.37□□□□□ -0.27
CLK4-208ENST00000520957 PPP3CAQ08209 521 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 SURF1Q15526 300 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 PTPN14Q15678 1187 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 USP41Q3LFD5 358 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 TDRD10Q5VZ19 366 aaKnown RBP13.37□□□□□ -0.27
CLK4-208ENST00000520957 RSPO2Q6UXX9 243 aaPredicted RBP13.37□□□□□ -0.27
CLK4-208ENST00000520957 C11orf57Q6ZUT1 292 aaPredicted RBP13.37□□□□□ -0.27
CLK4-208ENST00000520957 NT5DC4Q86YG4 428 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 CACTINQ8WUQ7 758 aaKnown RBP13.37□□□□□ -0.27
CLK4-208ENST00000520957 RIN2Q8WYP3 895 aaPredicted RBP13.37□□□□□ -0.27
CLK4-208ENST00000520957 PRDM6Q9NQX0 595 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 UNC80Q8N2C7 3258 aa13.37□□□□□ -0.27
CLK4-208ENST00000520957 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.36□□□□□ -0.27
CLK4-208ENST00000520957 ADAM12O43184 909 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 CNPP09543 421 aaKnown RBP13.36□□□□□ -0.27
CLK4-208ENST00000520957 FGFR3P22607 806 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 PPP1R2P41236 205 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 GCLMP48507 274 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 NRIP1P48552 1158 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 DSG1Q02413 1049 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 HYAL1Q12794 435 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 KIAA1841Q6NSI8 718 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 SASS6Q6UVJ0 657 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 SV2AQ7L0J3 742 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 IRF2BP1Q8IU81 584 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 GLYCTKQ8IVS8 523 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 LNX1Q8TBB1 728 aaPredicted RBP13.36□□□□□ -0.27
CLK4-208ENST00000520957 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 ANKRD36BP1Q96IX9 119 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 TTPALQ9BTX7 342 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 HERC2P3Q9BVR0 1158 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 MMRN2Q9H8L6 949 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 NGRNQ9NPE2 291 aaKnown RBP13.36□□□□□ -0.27
CLK4-208ENST00000520957 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLK4-208ENST00000520957 STXBP5LQ9Y2K9 1186 aa13.36□□□□□ -0.27
CLK4-208ENST00000520957 BICDL2A1A5D9 508 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 CARNS1A5YM72 827 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 MAPK13O15264 365 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 LINC01565O15544 149 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 VNN1O95497 513 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 TNNC2P02585 160 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 GLUD2P49448 558 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 AARSP49588 968 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLK4-208ENST00000520957 CDR1P51861 262 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 RBP5P82980 135 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 BFSP1Q12934 665 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 SMC1AQ14683 1233 aaKnown RBP13.35□□□□□ -0.27
CLK4-208ENST00000520957 HSP90AA4PQ58FG1 418 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 INTS8Q75QN2 995 aaKnown RBP13.35□□□□□ -0.27
CLK4-208ENST00000520957 FILIP1Q7Z7B0 1213 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 MAFAQ8NHW3 353 aaPredicted RBP13.35□□□□□ -0.27
CLK4-208ENST00000520957 SUSD3Q96L08 255 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 SENP8Q96LD8 212 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 MKNK1Q9BUB5 465 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 NSUN3Q9H649 340 aaKnown RBP13.35□□□□□ -0.27
CLK4-208ENST00000520957 TLE6Q9H808 572 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 MRPL17Q9NRX2 175 aaKnown RBP13.35□□□□□ -0.27
CLK4-208ENST00000520957 ITGA11Q9UKX5 1188 aa13.35□□□□□ -0.27
CLK4-208ENST00000520957 NLRC5Q86WI3 1866 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 SYCE3A1L190 88 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 KPNA7A9QM74 516 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 TEX28O15482 410 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 URODP06132 367 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms