RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 MPP4Q96JB8 637 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 ZNF184Q99676 751 aaPredicted RBP9.19□□□□□ -0.94
SHPRH-208ENST00000520752 LRRC3Q9BY71 257 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 GBA3Q9H227 469 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 GSX1Q9H4S2 264 aaPredicted RBP9.19□□□□□ -0.94
SHPRH-208ENST00000520752 CCSER2Q9H7U1 834 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 PLGRKTQ9HBL7 147 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 INTS9Q9NV88 658 aaKnown RBP9.19□□□□□ -0.94
SHPRH-208ENST00000520752 ETNK2Q9NVF9 386 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 IL20Q9NYY1 176 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 PLK2Q9NYY3 685 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 CRIM1Q9NZV1 1036 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 NKX1-2Q9UD57 310 aaPredicted RBP9.19□□□□□ -0.94
SHPRH-208ENST00000520752 PRKAG3Q9UGI9 489 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 ANGPTL2Q9UKU9 493 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 DSEQ9UL01 958 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 MTUS1Q9ULD2 1270 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 KCNH3Q9ULD8 1083 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 CAPN11Q9UMQ6 739 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 GIT1Q9Y2X7 761 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 TIMM22Q9Y584 194 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 SNX9Q9Y5X1 595 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 CLIC4Q9Y696 253 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 CAMSAP1Q5T5Y3 1602 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 A0A088AWK7 358 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 BICDL2A1A5D9 508 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 CHL1O00533 1208 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 SH2B2O14492 632 aaPredicted RBP9.18□□□□□ -0.94
SHPRH-208ENST00000520752 TMPRSS2O15393 492 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 AP1G1O43747 822 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 DEPDC5O75140 1603 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 NUDT17P0C025 328 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 ADH5P11766 374 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 DRD2P14416 443 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 ZNF12P17014 697 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 MATR3P43243 847 aaKnown RBP eCLIP9.18□□□□□ -0.94
SHPRH-208ENST00000520752 RTP1P59025 263 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 GUCY1B3Q02153 619 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 ID3Q02535 119 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 TBL3Q12788 808 aaKnown RBP9.18□□□□□ -0.94
SHPRH-208ENST00000520752 PNOCQ13519 176 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 NCAPD2Q15021 1401 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 SPA17Q15506 151 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 EZH2Q15910 746 aaKnown RBP9.18□□□□□ -0.94
SHPRH-208ENST00000520752 SEPT7Q16181 437 aaKnown RBP9.18□□□□□ -0.94
SHPRH-208ENST00000520752 DDB1Q16531 1140 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 ARL13BQ3SXY8 428 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 UMODL1Q5DID0 1318 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 SNX30Q5VWJ9 437 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 PDXDC1Q6P996 788 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 PNPLA7Q6ZV29 1317 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 TAOK1Q7L7X3 1001 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 SFR1Q86XK3 245 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 WDR75Q8IWA0 830 aaKnown RBP9.18□□□□□ -0.94
SHPRH-208ENST00000520752 MYO1HQ8N1T3 1032 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 CARMIL3Q8ND23 1372 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.18□□□□□ -0.94
SHPRH-208ENST00000520752 UCMAQ8WVF2 138 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 CPLX3Q8WVH0 158 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 GAB3Q8WWW8 586 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 CASKIN2Q8WXE0 1202 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 FAM46AQ96IP4 442 aaKnown RBP9.18□□□□□ -0.94
SHPRH-208ENST00000520752 COX4I2Q96KJ9 171 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 UBL7Q96S82 380 aaPredicted RBP9.18□□□□□ -0.94
SHPRH-208ENST00000520752 UBAC1Q9BSL1 405 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 DDX47Q9H0S4 455 aaKnown RBP9.18□□□□□ -0.94
SHPRH-208ENST00000520752 TPK1Q9H3S4 243 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 RPAP3Q9H6T3 665 aaPredicted RBP9.18□□□□□ -0.94
SHPRH-208ENST00000520752 PIH1D3Q9NQM4 214 aaKnown RBP9.18□□□□□ -0.94
SHPRH-208ENST00000520752 ATAD3AQ9NVI7 634 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 STX18Q9P2W9 335 aaKnown RBP9.18□□□□□ -0.94
SHPRH-208ENST00000520752 PPP1R1BQ9UD71 204 aaPredicted RBP9.18□□□□□ -0.94
SHPRH-208ENST00000520752 RASAL2Q9UJF2 1139 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 TSC22D4Q9Y3Q8 395 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 ZNF711Q9Y462 761 aa9.18□□□□□ -0.94
SHPRH-208ENST00000520752 A8MXQ7 604 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 GFRA2O00451 464 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 KMOO15229 486 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 ZNF185O15231 689 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 PJA2O43164 708 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 FAM153BP0C7A2 387 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 FOSL1P15407 271 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 CHN1P15882 459 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 GLB1P16278 677 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 GNAT2P19087 354 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 IARSP41252 1262 aaKnown RBP9.17□□□□□ -0.94
SHPRH-208ENST00000520752 TXKP42681 527 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 RNASELQ05823 741 aaKnown RBP9.17□□□□□ -0.94
SHPRH-208ENST00000520752 RING1Q06587 406 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 STK3Q13188 491 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 MPP2Q14168 576 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 INPP5AQ14642 412 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 FXNQ16595 210 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 KRT71Q3SY84 523 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 FAM153CQ494X1 144 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 BEND3Q5T5X7 828 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 OLFML2BQ68BL8 750 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 DHRS4L2Q6PKH6 230 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 LRRC74BQ6ZQY2 392 aa9.17□□□□□ -0.94
SHPRH-208ENST00000520752 UBE2Q1Q7Z7E8 422 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms