RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 PCDHB7Q9Y5E2 793 aa23.11■■□□□ 1.29
PTP4A3-203ENST00000520105 PNMA6AP0CW24 399 aaPredicted RBP23.11■■□□□ 1.29
PTP4A3-203ENST00000520105 RBP5P82980 135 aa23.11■■□□□ 1.29
PTP4A3-203ENST00000520105 DRAP1Q14919 205 aaPredicted RBP23.11■■□□□ 1.29
PTP4A3-203ENST00000520105 NAB2Q15742 525 aa23.11■■□□□ 1.29
PTP4A3-203ENST00000520105 PDXDC1Q6P996 788 aa23.11■■□□□ 1.29
PTP4A3-203ENST00000520105 FAM43BQ6ZT52 329 aaPredicted RBP23.11■■□□□ 1.29
PTP4A3-203ENST00000520105 SPAG5Q96R06 1193 aa23.11■■□□□ 1.29
PTP4A3-203ENST00000520105 DNAJC7Q99615 494 aa23.11■■□□□ 1.29
PTP4A3-203ENST00000520105 STK33Q9BYT3 514 aa23.11■■□□□ 1.29
PTP4A3-203ENST00000520105 KCNF1Q9H3M0 494 aa23.11■■□□□ 1.29
PTP4A3-203ENST00000520105 SCN1AP35498 2009 aa23.1■■□□□ 1.29
PTP4A3-203ENST00000520105 MICAL3Q7RTP6 2002 aa23.1■■□□□ 1.29
PTP4A3-203ENST00000520105 XPOTO43592 962 aaKnown RBP23.1■■□□□ 1.29
PTP4A3-203ENST00000520105 ZNF699Q32M78 642 aa23.1■■□□□ 1.29
PTP4A3-203ENST00000520105 C9orf57Q5W0N0 161 aa23.1■■□□□ 1.29
PTP4A3-203ENST00000520105 E4F1Q66K89 784 aaPredicted RBP23.1■■□□□ 1.29
PTP4A3-203ENST00000520105 PANX2Q96RD6 677 aa23.1■■□□□ 1.29
PTP4A3-203ENST00000520105 ARID3AQ99856 593 aa23.1■■□□□ 1.29
PTP4A3-203ENST00000520105 ELAC1Q9H777 363 aaKnown RBP23.1■■□□□ 1.29
PTP4A3-203ENST00000520105 CACNG4Q9UBN1 327 aa23.1■■□□□ 1.29
PTP4A3-203ENST00000520105 R3HCC1Q9Y3T6 440 aaKnown RBP23.1■■□□□ 1.29
PTP4A3-203ENST00000520105 JAM2P57087 298 aa23.09■■□□□ 1.29
PTP4A3-203ENST00000520105 GLB1LQ6UWU2 654 aa23.09■■□□□ 1.29
PTP4A3-203ENST00000520105 RPUSD2Q8IZ73 545 aaKnown RBP23.09■■□□□ 1.29
PTP4A3-203ENST00000520105 CRIPAKQ8N1N5 446 aa23.09■■□□□ 1.29
PTP4A3-203ENST00000520105 BADQ92934 168 aa23.09■■□□□ 1.29
PTP4A3-203ENST00000520105 HPDLQ96IR7 371 aa23.09■■□□□ 1.29
PTP4A3-203ENST00000520105 GPR88Q9GZN0 384 aa23.09■■□□□ 1.29
PTP4A3-203ENST00000520105 CYP3A5P20815 502 aa23.09■■□□□ 1.29
PTP4A3-203ENST00000520105 WDR72Q3MJ13 1102 aa23.09■■□□□ 1.29
PTP4A3-203ENST00000520105 TRIM44Q96DX7 344 aaPredicted RBP23.09■■□□□ 1.29
PTP4A3-203ENST00000520105 SLC38A7Q9NVC3 462 aa23.09■■□□□ 1.29
PTP4A3-203ENST00000520105 NXF1Q9UBU9 619 aaKnown RBP23.09■■□□□ 1.29
PTP4A3-203ENST00000520105 LRFN2Q9ULH4 789 aa23.09■■□□□ 1.29
PTP4A3-203ENST00000520105 ANO9A1A5B4 782 aa23.08■■□□□ 1.29
PTP4A3-203ENST00000520105 FOXN3O00409 490 aaPredicted RBP23.08■■□□□ 1.29
PTP4A3-203ENST00000520105 SYN1P17600 705 aa23.08■■□□□ 1.29
PTP4A3-203ENST00000520105 RFX1P22670 979 aa23.08■■□□□ 1.29
PTP4A3-203ENST00000520105 MFAP3P55082 362 aa23.08■■□□□ 1.29
PTP4A3-203ENST00000520105 GCNT1Q02742 428 aa23.08■■□□□ 1.29
PTP4A3-203ENST00000520105 ARID5AQ03989 594 aa23.08■■□□□ 1.29
PTP4A3-203ENST00000520105 TSR1Q2NL82 804 aaKnown RBP23.08■■□□□ 1.29
PTP4A3-203ENST00000520105 WDR59Q6PJI9 974 aa23.08■■□□□ 1.29
PTP4A3-203ENST00000520105 POLIQ9UNA4 740 aa23.08■■□□□ 1.29
PTP4A3-203ENST00000520105 TDRD15B5MCY1 1934 aaKnown RBP23.08■■□□□ 1.28
PTP4A3-203ENST00000520105 F8VZ95 297 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 PIRO00625 290 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 INPPL1O15357 1258 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 EVI5O60447 810 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 ATICP31939 592 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 GATMP50440 423 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 CUL2Q13617 745 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 C16orf59Q7L2K0 433 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 RABGGTAQ92696 567 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 HTATIP2Q9BUP3 242 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 ABHD14A-ACY1A0A1B0GW23 586 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 UPP2O95045 317 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 IGFBP6P24592 240 aaPredicted RBP23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 CCZ1BP86790 482 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 CCZ1P86791 482 aaPredicted RBP23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 ZNF667Q5HYK9 610 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 NOMO2Q5JPE7 1267 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 SFMBT2Q5VUG0 894 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 TMEM139Q8IV31 216 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 TAF4BQ92750 862 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 BAG1Q99933 345 aaPredicted RBP23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 PAAF1Q9BRP4 392 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 IL23AQ9NPF7 189 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 DAAM1Q9Y4D1 1078 aa23.07■■□□□ 1.28
PTP4A3-203ENST00000520105 CASTOR2A6NHX0 329 aa23.06■■□□□ 1.28
PTP4A3-203ENST00000520105 LRPAP1P30533 357 aa23.06■■□□□ 1.28
PTP4A3-203ENST00000520105 GRIK3Q13003 919 aa23.06■■□□□ 1.28
PTP4A3-203ENST00000520105 SCARA5Q6ZMJ2 495 aa23.06■■□□□ 1.28
PTP4A3-203ENST00000520105 CHP1Q99653 195 aa23.06■■□□□ 1.28
PTP4A3-203ENST00000520105 NIF3L1Q9GZT8 377 aa23.06■■□□□ 1.28
PTP4A3-203ENST00000520105 ZMYND8Q9ULU4 1186 aaPredicted RBP23.06■■□□□ 1.28
PTP4A3-203ENST00000520105 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.06■■□□□ 1.28
PTP4A3-203ENST00000520105 SKILP12757 684 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 HNRNPH3P31942 346 aaKnown RBP23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 SOX5P35711 763 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 USP8P40818 1118 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 STAT1P42224 750 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 CLCNKBP51801 687 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 MYO1EQ12965 1108 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 OTOP2Q7RTS6 562 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 ABI1Q8IZP0 508 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 NUCKS1Q9H1E3 243 aaKnown RBP23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 VRTNQ9H8Y1 702 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 AIPL1Q9NZN9 384 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 MYO6Q9UM54 1294 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 GFPT2O94808 682 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 PFKMP08237 780 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 WEE2P0C1S8 567 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 ASPAP45381 313 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 ZNF280BQ86YH2 543 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 NPAS4Q8IUM7 802 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 LRRC52Q8N7C0 313 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 URGCPQ8TCY9 931 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 SHC3Q92529 594 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms