RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 CLTAP09496 248 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 MATR3P43243 847 aaKnown RBP eCLIP13.56□□□□□ -0.244e-7■■■■□ 25.8
TRAPPC9-206ENST00000519482 ZNF131P52739 623 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 NTHL1P78549 312 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 ROR1Q01973 937 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 MRPL58Q14197 206 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 SF3A1Q15459 793 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 PABPC1LQ4VXU2 614 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 MTSS1LQ765P7 747 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 GPBP1Q86WP2 473 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 GAS2L3Q86XJ1 694 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 CCDC105Q8IYK2 499 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 GPR152Q8TDT2 470 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 LEO1Q8WVC0 666 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 FGF13Q92913 245 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 FGF14Q92915 247 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 C18orf25Q96B23 403 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 BICD1Q96G01 975 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 CHAMP1Q96JM3 812 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 SUSD3Q96L08 255 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 TSPAN18Q96SJ8 248 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 PARVGQ9HBI0 331 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 BLOC1S4Q9NUP1 217 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 FAM86C1Q9NVL1 165 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 TFIP11Q9UBB9 837 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 DNMT3BQ9UBC3 853 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 ANK1P16157 1881 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 MIA3Q5JRA6 1907 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 TTC26A0AVF1 554 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 ARHGEF37A1IGU5 675 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 WDR27A2RRH5 827 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 FAM13AO94988 1023 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 PIGRP01833 764 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 LRG1P02750 347 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 ATF2P15336 505 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 PLCG1P19174 1290 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 CYP3A5P20815 502 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 LRPAP1P30533 357 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 ELF1P32519 619 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 NBL1P41271 181 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 LIG4P49917 911 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 SEZ6Q53EL9 994 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 TPGS2Q68CL5 300 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 PHLDB3Q6NSJ2 640 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 TCEAL8Q8IYN2 117 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 MYCT1Q8N699 235 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 APPL2Q8NEU8 664 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 RASSF8Q8NHQ8 419 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 ITFG1Q8TB96 612 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 RAD54LQ92698 747 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 HAPLN2Q9GZV7 340 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 AVENQ9NQS1 362 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 FBXL5Q9UKA1 691 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 CA14Q9ULX7 337 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 MAFFQ9ULX9 164 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 TBX20Q9UMR3 447 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 MYO15AQ9UKN7 3530 aa13.55□□□□□ -0.24
TRAPPC9-206ENST00000519482 DMDP11532 3685 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 K7ENM7 598 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 STK25O00506 426 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 PRRG1O14668 218 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 HNRNPDLO14979 420 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 XPOTO43592 962 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 KRT18P05783 430 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 ADRB2P07550 413 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 CXCL8P10145 99 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 PTPN2P17706 415 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 RFX1P22670 979 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 PPP2R3AQ06190 1150 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 DHX8Q14562 1220 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 MCM6Q14566 821 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 KARSQ15046 597 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 ZBTB6Q15916 424 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 ZNF280DQ6N043 979 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 PARM1Q6UWI2 310 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 DTWD2Q8NBA8 298 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 LRRC15Q8TF66 581 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 LARP4BQ92615 738 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 DDX12PQ92771 950 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 OXCT2Q9BYC2 517 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 CCSER1Q9C0I3 900 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 TSPY26PQ9H489 355 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 ARHGEF3Q9NR81 526 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 HCFC1R1Q9NWW0 138 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 TUBGCP4Q9UGJ1 667 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 UBQLN1Q9UMX0 589 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 PCDHB8Q9UN66 801 aa13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 MRPS23Q9Y3D9 190 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-206ENST00000519482 TCHHQ07283 1943 aa13.53□□□□□ -0.24
TRAPPC9-206ENST00000519482 M0QZQ0 153 aa13.53□□□□□ -0.24
TRAPPC9-206ENST00000519482 OGTO15294 1046 aa13.53□□□□□ -0.24
TRAPPC9-206ENST00000519482 FAM189A1O60320 539 aa13.53□□□□□ -0.24
TRAPPC9-206ENST00000519482 GFRA3O60609 400 aa13.53□□□□□ -0.24
TRAPPC9-206ENST00000519482 TBCAO75347 108 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-206ENST00000519482 MARCKSP29966 332 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-206ENST00000519482 GTF2BQ00403 316 aa13.53□□□□□ -0.24
TRAPPC9-206ENST00000519482 GRIN1Q05586 938 aa13.53□□□□□ -0.24
TRAPPC9-206ENST00000519482 CTXN3Q4LDR2 81 aa13.53□□□□□ -0.24
TRAPPC9-206ENST00000519482 CD302Q8IX05 232 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms