RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 AGPAT1Q99943 283 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 SYT11Q9BT88 431 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 APOL6Q9BWW8 343 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 IRX2Q9BZI1 471 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-209ENST00000519141 PAK6Q9NQU5 681 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-209ENST00000519141 SEPT11Q9NVA2 429 aaKnown RBP13.29□□□□□ -0.28
SPIDR-209ENST00000519141 TRIM10Q9UDY6 481 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 NAGPAQ9UK23 515 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 ITGA11Q9UKX5 1188 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 ST3GAL5Q9UNP4 418 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 HES2Q9Y543 173 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 PAXBP1Q9Y5B6 917 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 ATP8B3O60423 1300 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 UMODL1Q5DID0 1318 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 DNM1LO00429 736 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 SGPL1O95470 568 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 ABL1P00519 1130 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 NFX1Q12986 1120 aaKnown RBP13.28□□□□□ -0.28
SPIDR-209ENST00000519141 TRIM71Q2Q1W2 868 aaKnown RBP13.28□□□□□ -0.28
SPIDR-209ENST00000519141 ZNF569Q5MCW4 686 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 SLC43A3Q8NBI5 491 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 U2AF1L4Q8WU68 220 aaKnown RBP13.28□□□□□ -0.28
SPIDR-209ENST00000519141 SLC20A1Q8WUM9 679 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 WDR24Q96S15 920 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 XYLT2Q9H1B5 865 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 CHST12Q9NRB3 414 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 DPP3Q9NY33 737 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 SIX4Q9UIU6 781 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 NENFQ9UMX5 172 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 MACROD2A1Z1Q3 448 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 ARVCFO00192 962 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 AKAP5P24588 427 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 CASQ1P31415 396 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 ATICP31939 592 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 BPIFB4P59827 614 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 PAK2Q13177 524 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 ZNF667Q5HYK9 610 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 FAM26DQ5JW98 314 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 FBXO47Q5MNV8 452 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 PRPF38BQ5VTL8 546 aaKnown RBP13.28□□□□□ -0.28
SPIDR-209ENST00000519141 SCARA3Q6AZY7 606 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 NOP9Q86U38 636 aaKnown RBP13.28□□□□□ -0.28
SPIDR-209ENST00000519141 SLC47A2Q86VL8 602 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 SLC30A5Q8TAD4 765 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 OLIG1Q8TAK6 271 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 SECISBP2LQ93073 1101 aaKnown RBP13.28□□□□□ -0.28
SPIDR-209ENST00000519141 DEFB118Q96PH6 123 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 SEZ6LQ9BYH1 1024 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 TRPV6Q9H1D0 765 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 CNTN3Q9P232 1028 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 PARP2Q9UGN5 583 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 NOCTQ9UK39 431 aaKnown RBP13.28□□□□□ -0.28
SPIDR-209ENST00000519141 IPPQ9Y573 584 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 PCDHB4Q9Y5E5 795 aa13.28□□□□□ -0.28
SPIDR-209ENST00000519141 SZT2Q5T011 3432 aa13.27□□□□□ -0.28
SPIDR-209ENST00000519141 H2AFZP0C0S5 128 aa13.27□□□□□ -0.29
SPIDR-209ENST00000519141 GHRP10912 638 aa13.27□□□□□ -0.29
SPIDR-209ENST00000519141 CYP11B1P15538 503 aa13.27□□□□□ -0.29
SPIDR-209ENST00000519141 ACO1P21399 889 aaKnown RBP13.27□□□□□ -0.29
SPIDR-209ENST00000519141 POLR2BP30876 1174 aaKnown RBP13.27□□□□□ -0.29
SPIDR-209ENST00000519141 YWHAEP62258 255 aaKnown RBP13.27□□□□□ -0.29
SPIDR-209ENST00000519141 TAF3Q5VWG9 929 aa13.27□□□□□ -0.29
SPIDR-209ENST00000519141 SMYD5Q6GMV2 418 aa13.27□□□□□ -0.29
SPIDR-209ENST00000519141 TMEM270Q6UE05 265 aa13.27□□□□□ -0.29
SPIDR-209ENST00000519141 SCARA5Q6ZMJ2 495 aa13.27□□□□□ -0.29
SPIDR-209ENST00000519141 H2AFVQ71UI9 128 aa13.27□□□□□ -0.29
SPIDR-209ENST00000519141 UBE2Q1Q7Z7E8 422 aa13.27□□□□□ -0.29
SPIDR-209ENST00000519141 HACE1Q8IYU2 909 aa13.27□□□□□ -0.29
SPIDR-209ENST00000519141 RPUSD2Q8IZ73 545 aaKnown RBP13.27□□□□□ -0.29
SPIDR-209ENST00000519141 USP38Q8NB14 1042 aa13.27□□□□□ -0.29
SPIDR-209ENST00000519141 RBBP8NLQ8NC74 664 aaPredicted RBP13.27□□□□□ -0.29
SPIDR-209ENST00000519141 SMG8Q8ND04 991 aaKnown RBP13.27□□□□□ -0.29
SPIDR-209ENST00000519141 BEST2Q8NFU1 509 aa13.27□□□□□ -0.29
SPIDR-209ENST00000519141 TSPAN18Q96SJ8 248 aa13.27□□□□□ -0.29
SPIDR-209ENST00000519141 ERVK-5Q9HDB9 667 aa13.27□□□□□ -0.29
SPIDR-209ENST00000519141 XPOTO43592 962 aaKnown RBP13.26□□□□□ -0.29
SPIDR-209ENST00000519141 P4HA1P13674 534 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 ZSCAN20P17040 1043 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-209ENST00000519141 CD52P31358 61 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 ASPAP45381 313 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 GUCY2FP51841 1108 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 RBP5P82980 135 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 CDR2Q01850 454 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 LPIN1Q14693 890 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 ZNF618Q5T7W0 954 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 ALKAL1Q6UXT8 129 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 SLC35F6Q8N357 371 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 CXorf38Q8TB03 319 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 FAXDC2Q96IV6 333 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 PACSIN1Q9BY11 444 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 AGO3Q9H9G7 860 aaKnown RBP13.26□□□□□ -0.29
SPIDR-209ENST00000519141 ACP6Q9NPH0 428 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 FAM105AQ9NUU6 356 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 NXF1Q9UBU9 619 aaKnown RBP13.26□□□□□ -0.29
SPIDR-209ENST00000519141 INTUQ9ULD6 942 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 PADI3Q9ULW8 664 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 UBQLN1Q9UMX0 589 aaKnown RBP13.26□□□□□ -0.29
SPIDR-209ENST00000519141 AGAP1Q9UPQ3 857 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 CNTN6Q9UQ52 1028 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 PCDHB2Q9Y5E7 798 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms