RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 NR1H3Q13133 447 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 SPIDRQ14159 915 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 EPHA7Q15375 998 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 LETM2Q2VYF4 491 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 MMEL1Q495T6 779 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 FAM26FQ5R3K3 315 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 KCNK18Q7Z418 384 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 NLRX1Q86UT6 975 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 SFR1Q86XK3 245 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 ULK2Q8IYT8 1036 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 PLEKHO2Q8TD55 490 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 SLCO2A1Q92959 643 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 DNAJC19Q96DA6 116 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 KCTD10Q9H3F6 313 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 KIAA1586Q9HCI6 787 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 TUBA8Q9NY65 449 aaPredicted RBP14.34□□□□□ -0.11
PABPC1-208ENST00000519004 SLC7A8Q9UHI5 535 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 FADS3Q9Y5Q0 445 aa14.34□□□□□ -0.11
PABPC1-208ENST00000519004 TYROBPO43914 113 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 ZBED4O75132 1171 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 TM7SF2O76062 418 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 LMNB1P20700 586 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 CA4P22748 312 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 PIK3CAP42336 1068 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 PKN2Q16513 984 aaKnown RBP14.33□□□□□ -0.12
PABPC1-208ENST00000519004 HSP90AA5PQ58FG0 334 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 TEKT1Q969V4 418 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 SNF8Q96H20 258 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 CCDC77Q9BR77 488 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 SYT11Q9BT88 431 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 GRIP2Q9C0E4 1043 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 KCNK13Q9HB14 408 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 TAS2R14Q9NYV8 317 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 ASIC3Q9UHC3 531 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 SAP30BPQ9UHR5 308 aaKnown RBP14.33□□□□□ -0.12
PABPC1-208ENST00000519004 ZNHIT2Q9UHR6 403 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 MTUS1Q9ULD2 1270 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 FAM32AQ9Y421 112 aaKnown RBP14.33□□□□□ -0.12
PABPC1-208ENST00000519004 B2RBV5 119 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 FBP2O00757 339 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 ADAM23O75077 832 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 CBFA2T3O75081 653 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 FKBP6O75344 327 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 CAPN15O75808 1086 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 PDE8BO95263 885 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 PDGFRBP09619 1106 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 NAA20P61599 178 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 XIAPP98170 497 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 NCOA4Q13772 614 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 C6orf163Q5TEZ5 329 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 C11orf63Q6NUN7 778 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 LVRNQ6Q4G3 990 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 TMPRSS6Q8IU80 811 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 CROCCP3Q8IVE0 287 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 SLC25A41Q8N5S1 370 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 C9orf72Q96LT7 481 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 ISCA1Q9BUE6 129 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 KLHL4Q9C0H6 718 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 LRRC19Q9H756 370 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 DNAJC18Q9H819 358 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 S100A14Q9HCY8 104 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 GPCPD1Q9NPB8 672 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 AMOTL2Q9Y2J4 779 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 NEU2Q9Y3R4 380 aa14.33□□□□□ -0.12
PABPC1-208ENST00000519004 HBS1LQ9Y450 684 aaKnown RBP14.33□□□□□ -0.12
PABPC1-208ENST00000519004 H3BRJ5 948 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 NFKBIAP25963 317 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 RXRGP48443 463 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 FAM91A1Q658Y4 838 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 RNF207Q6ZRF8 634 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 ZNF276Q8N554 614 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 RBM15BQ8NDT2 890 aaKnown RBP14.32□□□□□ -0.12
PABPC1-208ENST00000519004 PLA2G12BQ9BX93 195 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 TMEM120AQ9BXJ8 343 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 LRRC27Q9C0I9 530 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 KAT6BQ8WYB5 2073 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 MATN2O00339 956 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 FGRP09769 529 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 PHKG2P15735 406 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 PEX2P28328 305 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 HADHBP55084 474 aaKnown RBP14.32□□□□□ -0.12
PABPC1-208ENST00000519004 ZBTB16Q05516 673 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 MAP3K21Q5TCX8 1036 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 C1orf146Q5VVC0 180 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 AAGABQ6PD74 315 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 PPP1R10Q96QC0 940 aaKnown RBP14.32□□□□□ -0.12
PABPC1-208ENST00000519004 NUDT12Q9BQG2 462 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 TRIM55Q9BYV6 548 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 CNNM1Q9NRU3 951 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 ARMCX1Q9P291 453 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 ADAMTS6Q9UKP5 1117 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 FAF1Q9UNN5 650 aaPredicted RBP14.32□□□□□ -0.12
PABPC1-208ENST00000519004 PCDHA2Q9Y5H9 948 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 DCCP43146 1447 aa14.32□□□□□ -0.12
PABPC1-208ENST00000519004 ANKRD36CQ5JPF3 1778 aa14.31□□□□□ -0.12
PABPC1-208ENST00000519004 ARHGAP10A1A4S6 786 aa14.31□□□□□ -0.12
PABPC1-208ENST00000519004 FCHO1O14526 889 aa14.31□□□□□ -0.12
PABPC1-208ENST00000519004 TXNDC9O14530 226 aa14.31□□□□□ -0.12
PABPC1-208ENST00000519004 NDUFB5O43674 189 aa14.31□□□□□ -0.12
PABPC1-208ENST00000519004 DKC1O60832 514 aaKnown RBP eCLIP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms